RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 SCMH1Q96GD3 660 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 ERVMER34-1Q9H9K5 563 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 SEMA3GQ9NS98 782 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 RDH8Q9NYR8 311 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 GULP1Q9UBP9 304 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 EXTL2Q9UBQ6 330 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 SCML1Q9UN30 329 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 FKBP7Q9Y680 259 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 CHD7Q9P2D1 2997 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 GREB1Q4ZG55 1949 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 LANCL1O43813 399 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 ARAFP10398 606 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 ELK1P19419 428 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 DGKGP49619 791 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 SPDYE7PQ495Y7 208 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 SLC25A30Q5SVS4 291 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 PSRC1Q6PGN9 363 aaPredicted RBP14.66□□□□□ -0.06
SSR4-206ENST00000460616 NEIL3Q8TAT5 605 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 CIDECQ96AQ7 238 aaPredicted RBP14.66□□□□□ -0.06
SSR4-206ENST00000460616 ZNF578Q96N58 590 aaPredicted RBP14.66□□□□□ -0.06
SSR4-206ENST00000460616 RBP7Q96R05 134 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 TMED9Q9BVK6 235 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 REEP4Q9H6H4 257 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 CWH43Q9H720 699 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 TBC1D17Q9HA65 648 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 BRF2Q9HAW0 419 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 NUDT15Q9NV35 164 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 MARCH5Q9NX47 278 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 TNFRSF10DQ9UBN6 386 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 ATP6V1HQ9UI12 483 aa14.66□□□□□ -0.06
SSR4-206ENST00000460616 HOXA2O43364 376 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 SH3BP5O60239 455 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 OR56A5P0C7T3 313 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 HSD3B1P14060 373 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 HSD3B2P26439 372 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 EPHA5P54756 1037 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 BTN1A1Q13410 526 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 GINS1Q14691 196 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 SPIN4Q56A73 249 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 CD276Q5ZPR3 534 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 FAM109BQ6ICB4 259 aaPredicted RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 TCTN3Q6NUS6 607 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 TMEM81Q6P7N7 255 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 CEP76Q8TAP6 659 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 TEFMQ96QE5 360 aaKnown RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 SEPT5Q99719 369 aaPredicted RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 OR51J1Q9H342 316 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 PLXNA3P51805 1871 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 A0A1B0GVM2 712 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 H0YIV9 168 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 GFYI3L273 518 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 TOR1AO14656 332 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 SMAD6O43541 496 aaKnown RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 SEMA7AO75326 666 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 H1F0P07305 194 aaKnown RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 GLULP15104 373 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 CFL1P23528 166 aaKnown RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 TIA1P31483 386 aaKnown RBP eCLIP14.65□□□□□ -0.06
SSR4-206ENST00000460616 ATP5C1P36542 298 aaKnown RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 GAS1P54826 345 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 AP1S2P56377 157 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 CTAG1AP78358 180 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 RAB40BQ12829 278 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 DSG2Q14126 1118 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 REEP3Q6NUK4 255 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 RTL4Q6ZR62 310 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 THOC6Q86W42 341 aaKnown RBP14.65□□□□□ -0.06
SSR4-206ENST00000460616 MARCH9Q86YJ5 346 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 ZBTB44Q8NCP5 570 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 RFT1Q96AA3 541 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 CXorf40BQ96DE9 158 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 RNFT2Q96EX2 444 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 ARHGAP9Q9BRR9 750 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 TM6SF2Q9BZW4 377 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 ZDHHC3Q9NYG2 299 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 STON1Q9Y6Q2 735 aa14.65□□□□□ -0.06
SSR4-206ENST00000460616 CHD5Q8TDI0 1954 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 SHISA3A0PJX4 238 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 PRRG1O14668 218 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 KPNA5O15131 536 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 EFCAB14O75071 495 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 GJB5O95377 273 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 TP53P04637 393 aaPredicted RBP14.64□□□□□ -0.07
SSR4-206ENST00000460616 IFNA16P05015 189 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 GALTP07902 379 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 ACP2P11117 423 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 ZNF8P17098 575 aaPredicted RBP14.64□□□□□ -0.07
SSR4-206ENST00000460616 SOAT1P35610 550 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 GIPRP48546 466 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 MAP2K6P52564 334 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 B4GALNT1Q00973 533 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 MRPL58Q14197 206 aaKnown RBP14.64□□□□□ -0.07
SSR4-206ENST00000460616 CDKN3Q16667 212 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 CXorf57Q6NSI4 855 aaKnown RBP14.64□□□□□ -0.07
SSR4-206ENST00000460616 ACSM5Q6NUN0 579 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 GPR26Q8NDV2 337 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 OR8K5Q8NH50 307 aa14.64□□□□□ -0.07
SSR4-206ENST00000460616 APOBEC4Q8WW27 367 aaKnown RBP14.64□□□□□ -0.07
SSR4-206ENST00000460616 HERVK_113Q902F9 699 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms