RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 TRMT12Q53H54 448 aaKnown RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 MANEAQ5SRI9 462 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 NKAIN2Q5VXU1 208 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 TSSK4Q6SA08 328 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 USP53Q70EK8 1073 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 SLC16A11Q8NCK7 471 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 FBLIM1Q8WUP2 373 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 HDAC2Q92769 488 aaKnown RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 NMD3Q96D46 503 aaKnown RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 DGCR14Q96DF8 476 aaKnown RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 SLC35A4Q96G79 324 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 SPACA7Q96KW9 195 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 ZNF354BQ96LW1 612 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 NPLQ9BXD5 320 aaPredicted RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 DDX18Q9NVP1 670 aaKnown RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 NDUFA13Q9P0J0 144 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 KCND3Q9UK17 655 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 SIT1Q9Y3P8 196 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 GMPPBQ9Y5P6 360 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 CCDC160A6NGH7 325 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 LMO7DNF2Z398 122 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 GADD45GO95257 159 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 EEF1B2P24534 225 aaKnown RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 GSSP48637 474 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 HMGA2P52926 109 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 HNRNPKP61978 463 aaKnown RBP eCLIP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 RPP38P78345 283 aaKnown RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 DEF8Q6ZN54 512 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 TSPYL5Q86VY4 417 aaPredicted RBP15.34■□□□□ 0.05
CAPN13-203ENST00000458085 DNAJC22Q8N4W6 341 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 BCL2L10Q9HD36 194 aa15.34■□□□□ 0.05
CAPN13-203ENST00000458085 TRBV4-1A0A0J9YWV2 114 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 LILRA5A6NI73 299 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 SERPINB7O75635 380 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 PIAS2O75928 621 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 HTR1AP08908 422 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 POU2F1P14859 743 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 PORP16435 677 aaPredicted RBP15.33■□□□□ 0.05
CAPN13-203ENST00000458085 GSTT1P30711 240 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 CHRNEQ04844 493 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 KEAP1Q14145 624 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 RBM48Q5RL73 367 aaKnown RBP15.33■□□□□ 0.05
CAPN13-203ENST00000458085 MFSD12Q6NUT3 480 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 KCTD8Q6ZWB6 473 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 BBS10Q8TAM1 723 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 DNASE2BQ8WZ79 361 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 TSC22D3Q99576 134 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 ACTRT3Q9BYD9 372 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 RBCK1Q9BYM8 510 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 SLC38A1Q9H2H9 487 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 PAK1IP1Q9NWT1 392 aaPredicted RBP15.33■□□□□ 0.05
CAPN13-203ENST00000458085 NTMQ9P121 344 aa15.33■□□□□ 0.05
CAPN13-203ENST00000458085 ARID1BQ8NFD5 2236 aaPredicted RBP15.33■□□□□ 0.04
CAPN13-203ENST00000458085 SLC1A7O00341 560 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 XPNPEP2O43895 674 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 FMO3P31513 532 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 PPM1FP49593 454 aaPredicted RBP15.33■□□□□ 0.04
CAPN13-203ENST00000458085 PMS2P3Q13401 168 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 IL18R1Q13478 541 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 PRTGQ2VWP7 1150 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 ZNF628Q5EBL2 1059 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 OR2L13Q8N349 312 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 PHF10Q8WUB8 498 aaKnown RBP15.33■□□□□ 0.04
CAPN13-203ENST00000458085 TGM7Q96PF1 710 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 ALPK1Q96QP1 1244 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 GABARAPL3Q9BY60 117 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 UCK1Q9HA47 277 aa15.33■□□□□ 0.04
CAPN13-203ENST00000458085 NMNAT1Q9HAN9 279 aaPredicted RBP15.33■□□□□ 0.04
CAPN13-203ENST00000458085 A0A0A6YYC8 382 aaPredicted RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 IGHV5-51A0A0C4DH38 117 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 I3L1I5 382 aaPredicted RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 CASC3O15234 703 aaKnown RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 FCMRO60667 390 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 CDH2P19022 906 aaPredicted RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 MAGEA8P43361 318 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 ANXA11P50995 505 aaKnown RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 BNIP3Q12983 259 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 SEC23BQ15437 767 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 KLHL35Q6PF15 583 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 OGFOD3Q6PK18 319 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 ZNF773Q6PK81 442 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 KRT73Q86Y46 540 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 BPIFB6Q8NFQ5 453 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 PITX2Q99697 317 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 POLR1BQ9H9Y6 1135 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 PAPOLBQ9NRJ5 636 aaKnown RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 KLHL3Q9UH77 587 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 MUTYHQ9UIF7 546 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 A0A1B0GVT2 93 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 BCAT2O15382 392 aaPredicted RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 FOXS1O43638 330 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 CT62P0C5K7 136 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 MYF5P13349 255 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 ALDH4A1P30038 563 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 PEX19P40855 299 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 GABRA4P48169 554 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 PDX1P52945 283 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 PIN1Q13526 163 aaPredicted RBP15.32■□□□□ 0.04
CAPN13-203ENST00000458085 NEDD8Q15843 81 aa15.32■□□□□ 0.04
CAPN13-203ENST00000458085 SMN1Q16637 294 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms