RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 CNR1P21554 472 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 RPS3P23396 243 aaKnown RBP eCLIP3.37□□□□□ -1.87
RBM39-220ENST00000455343 JAK1P23458 1154 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 HRH2P25021 359 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 HSD3B2P26439 372 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 ATP5DP30049 168 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 RPA3P35244 121 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 HSD17B2P37059 387 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PCYT1AP49585 367 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SSR4P51571 173 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 CLCN2P51788 898 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 RPS15AP62244 130 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 BTG2P78543 158 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 ZBED6P86452 979 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 TRIM14Q14142 442 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PRPSAP1Q14558 356 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 POU6F1Q14863 301 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 RPS6KA1Q15418 735 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SLC18A3Q16572 532 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PARP6Q2NL67 630 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 XKR6Q5GH73 641 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 MFSD4BQ5TF39 518 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 AFTPHQ6ULP2 937 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 OTOAQ7RTW8 1153 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 MAATS1Q7Z4T9 603 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 C1QL2Q7Z5L3 287 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 KATNAL2Q8IYT4 538 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 FBXW8Q8N3Y1 598 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 CAMKVQ8NCB2 501 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 B3GNT7Q8NFL0 401 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 TNIP2Q8NFZ5 429 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 OR5T3Q8NGG3 340 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 OR4L1Q8NH43 312 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 ACTL9Q8TC94 416 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 CTNNBL1Q8WYA6 563 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 PEX13Q92968 403 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 RAB24Q969Q5 203 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 HAUS1Q96CS2 278 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 LRRC46Q96FV0 321 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 FBXL20Q96IG2 436 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SGCZQ96LD1 299 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 FOPNLQ96NB1 174 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PRAP1Q96NZ9 151 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PANX3Q96QZ0 392 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PKP4Q99569 1192 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 EBNA1BP2Q99848 306 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 MACROD1Q9BQ69 325 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 FAM173AQ9BQD7 235 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 TSSK1BQ9BXA7 367 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 FAM129AQ9BZQ8 928 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 CLK4Q9HAZ1 481 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 ANKHQ9HCJ1 492 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 ACKR4Q9NPB9 350 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SEMA4BQ9NPR2 832 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 ZNF701Q9NV72 531 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 TMEM184CQ9NVA4 438 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 ANO10Q9NW15 660 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 TRMT1Q9NXH9 659 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 CHMP5Q9NZZ3 219 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SPRR3Q9UBC9 169 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 MTRF1LQ9UGC7 380 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 SLC2A6Q9UGQ3 507 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 CAPN11Q9UMQ6 739 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 DRG1Q9Y295 367 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 R3HDM2Q9Y2K5 976 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 NAALAD2Q9Y3Q0 740 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 HYOU1Q9Y4L1 999 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PCDHA3Q9Y5H8 950 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 TRGV5A0A0B4J1U4 118 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 TRBV11-1A0A0K0K1C0 115 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 MBD3L3A6NE82 208 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 ZNF860A6NHJ4 632 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 CD8B2A6NJW9 211 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 A8MVJ9 347 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 KRTAP29-1A8MX34 341 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 DEFB108AA8MXU0 73 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 H7C0C1 242 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 GFYI3L273 518 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 CES2O00748 559 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PHF1O43189 567 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 CTIFO43310 598 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 CHST10O43529 356 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PSTPIP1O43586 416 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 TLX2O43763 284 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 B4GALT2O60909 372 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 OR2J2O76002 312 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ZFAND5O76080 213 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 OR6B1O95007 311 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 CCNDBP1O95273 360 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SIX3O95343 332 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 STATHP02808 62 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 RFPL3SP0C7P2 107 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SMIM10L1P0DMW3 83 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 GATA3P23771 443 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ADRA1DP25100 572 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 LOXP28300 417 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 OPRM1P35372 400 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PPARGP37231 505 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 COILP38432 576 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 SOX3P41225 446 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms