RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 OPTCQ9UBM4 332 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF629Q9UEG4 869 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TRPS1Q9UHF7 1281 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PHF11Q9UIL8 331 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PTBP2Q9UKA9 531 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FBXL2Q9UKC9 423 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SNX24Q9Y343 169 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RNF11Q9Y3C5 154 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TESMINQ9Y4I5 508 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ASB4Q9Y574 426 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CR1P17927 2039 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SVEP1Q4LDE5 3571 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CADP27708 2225 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 A0A1W2PNV4 684 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PRAMEF25A6NGN4 478 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 K7EPI3 171 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SEC14L5O43304 696 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SMPD2O60906 423 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KERAO60938 352 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UGT2B11O75310 529 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TNFSF13O75888 250 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GPR75O95800 540 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ABCB1P08183 1280 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CTAGE8P0CG41 777 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CYP4B1P13584 511 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MTHFD2P13995 350 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GFAPP14136 432 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PCSK2P16519 638 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 STMN1P16949 149 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TSPAN8P19075 237 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HPDP32754 393 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GGT5P36269 586 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FEN1P39748 380 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PTGDSP41222 190 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 BUD31P41223 144 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CASP2P42575 452 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CORO7P57737 925 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RAB10P61026 200 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 POU4F1Q01851 419 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FAM27E3Q08E93 113 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CHD3Q12873 2000 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 STX5Q13190 355 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RCAN2Q14206 197 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SETDB1Q15047 1291 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TBCCQ15814 346 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HIST2H2ACQ16777 129 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PFKFB4Q16877 469 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GLIPR1L2Q4G1C9 344 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HLA-DQA1Q5Y7H0 255 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ANKRD34AQ69YU3 496 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TIGD3Q6B0B8 471 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HIST2H2AA3Q6FI13 130 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR52E8Q6IFG1 317 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MRM1Q6IN84 353 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ALKBH2Q6NS38 261 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PPP4R4Q6NUP7 873 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CYP20A1Q6UW02 462 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RAPH1Q70E73 1250 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PACS2Q86VP3 889 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CCDC25Q86WR0 208 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NUDT13Q86X67 352 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KIF18BQ86Y91 864 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GRAMD2AQ8IUY3 354 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CTAGE4Q8IX94 777 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PM20D2Q8IYS1 436 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CENPLQ8N0S6 344 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TCAIMQ8N3R3 496 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZCCHC7Q8N3Z6 543 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PPM1NQ8N819 430 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF615Q8N8J6 731 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR52B6Q8NGF0 335 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR1J4Q8NGS1 313 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PPP1R14CQ8TAE6 165 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ADIPOR1Q96A54 375 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RGMAQ96B86 450 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OMA1Q96E52 524 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LRRC46Q96FV0 321 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CMTM7Q96FZ5 175 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ART5Q96L15 291 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SFXN2Q96NB2 322 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NSUN5Q96P11 429 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FAM111AQ96PZ2 611 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ATOH8Q96SQ7 321 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SFXN3Q9BWM7 321 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ANGPTL4Q9BY76 406 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 BRINP2Q9C0B6 783 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PITHD1Q9GZP4 211 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR10A5Q9H207 317 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KCNF1Q9H3M0 494 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 POPDC3Q9HBV1 291 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SNX15Q9NRS6 342 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 BEX4Q9NWD9 120 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 QPCTLQ9NXS2 382 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FLRT3Q9NZU0 649 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 JKAMPQ9P055 326 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CPSF2Q9P2I0 782 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TXNDC16Q9P2K2 825 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms