RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 MMACHCQ9Y4U1 282 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SPG11Q96JI7 2443 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 COL11A1P12107 1806 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 FEZF1A0PJY2 475 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMEM120BA0PK00 339 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 LRRC30A6NM36 301 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRAMEF2O60811 474 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SAGP10523 405 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 MC3RP41968 323 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TOP3AQ13472 1001 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIWIL3Q7Z3Z3 882 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TICAM1Q8IUC6 712 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF540Q8NDQ6 660 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ARRDC2Q8TBH0 407 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SAP25Q8TEE9 199 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ABHD17AQ96GS6 310 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ITCHQ96J02 903 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 PKMYT1Q99640 499 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CHID1Q9BWS9 393 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 EBPLQ9BY08 206 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 LPAR2Q9HBW0 351 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 KCMF1Q9P0J7 381 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 POLR3HQ9Y535 204 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 COL4A1P02462 1669 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 A0A1W2PQ09 198 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TIMM8AO60220 97 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCL4P13236 92 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 GABRA1P14867 456 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 HK1P19367 917 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RANBP1P43487 201 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 GDF10P55107 478 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RELBQ01201 579 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 KLF1Q13351 362 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 LIPMQ5VYY2 423 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SP5Q6BEB4 398 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF595Q8IYB9 648 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ANKFN1Q8N957 763 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR8S1Q8NH09 359 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TANKQ92844 425 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF566Q969W8 418 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRIB3Q96RU7 358 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RBM24Q9BX46 236 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CLK4Q9HAZ1 481 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 LYVE1Q9Y5Y7 322 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 LOC100653049A0A140TA62 436 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 A0A1W2PPH5 198 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 BANF1O75531 89 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 KRT34O76011 436 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 JUNP05412 331 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 HSD11B1P28845 292 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 GDF5P43026 501 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PGFP49763 221 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 EPS8Q12929 822 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 SGCAQ16586 387 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 NDUFAF7Q7L592 441 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 LRRC25Q8N386 305 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 METTL25Q8N6Q8 603 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CIDECQ96AQ7 238 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FBXL8Q96CD0 374 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 BMFQ96LC9 184 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 F2RL3Q96RI0 385 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 EHD3Q9NZN3 535 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 SCHIP1Q9P0W5 487 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 WIF1Q9Y5W5 379 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FOXE1O00358 373 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TBX1O43435 398 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 MRPL33O75394 65 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 DRD3P35462 400 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 HES1Q14469 280 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CASP8Q14790 479 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 DPY19L1Q2PZI1 675 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TBRG1Q3YBR2 411 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR2A2Q6IF42 318 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ABRAXAS1Q6UWZ7 409 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 NXF5Q9H1B4 397 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 P2RY12Q9H244 342 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 RXFP3Q9NSD7 469 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 THUMPD1Q9NXG2 353 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 GPRC5BQ9NZH0 403 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC17A4Q9Y2C5 497 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 BTBD3Q9Y2F9 522 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TIMM22Q9Y584 194 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 SNX5Q9Y5X3 404 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 A0A0U1RQS6 177 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TARM1B6A8C7 271 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 UROSP10746 265 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 G6PDP11413 515 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PGCP20142 388 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 MAGEA8P43361 318 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 POU6F2P78424 691 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR1C1Q15619 314 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 SYT16Q17RD7 645 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM199XQ6PEV8 388 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 CDH24Q86UP0 819 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF845Q96IR2 970 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 HBEGFQ99075 208 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 NPLQ9BXD5 320 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 TEX101Q9BY14 249 aa5.31□□□□□ -1.56
CDC42BPA-209ENST00000448940 PITHD1Q9GZP4 211 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms