RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NETO1Q8TDF5 533 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 S100PBPQ96BU1 408 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 LRIG1Q96JA1 1093 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 ZIC5Q96T25 663 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 EPYCQ99645 322 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 TCF25Q9BQ70 676 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 SGIP1Q9BQI5 828 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 ASCL3Q9NQ33 180 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 CISHQ9NSE2 258 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 VAPAQ9P0L0 249 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 TRAPPC13A5PLN9 417 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 H7C1Q1 480 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 DPYSL4O14531 572 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CRHP06850 196 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ADRA2AP08913 450 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 USP17L7P0C7H9 530 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 LINC00614P0C842 121 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ABOP16442 354 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CSF2RBP32927 897 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SULT1E1P49888 294 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 PPT1P50897 306 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CCR6P51684 374 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CTBP2P56545 445 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 TNFRSF9Q07011 255 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SKP2Q13309 424 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 BOP1Q14137 746 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 DPYSL2Q16555 572 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 MINDY4Q4G0A6 757 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ARSIQ5FYB1 569 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 XKR7Q5GH72 579 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 FAM102AQ5T9C2 384 aaPredicted RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 FAM219BQ5XKK7 198 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 C22orf42Q6IC83 251 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 RGMBQ6NW40 437 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ARHGAP11AQ6P4F7 1023 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ASB18Q6ZVZ8 466 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SLC29A4Q7RTT9 530 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SLITRK4Q8IW52 837 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 RTL3Q8N8U3 475 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CHST14Q8NCH0 376 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 OR56A4Q8NGH8 313 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 OR52P1PQ8NH57 321 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 RPLP0P6Q8NHW5 317 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 RAB24Q969Q5 203 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 RAB3CQ96E17 227 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 P2RY11Q96G91 374 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 MARS2Q96GW9 593 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ATF6BQ99941 703 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ARL6Q9H0F7 186 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 NXF3Q9H4D5 531 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ISYNA1Q9NPH2 558 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 NPDC1Q9NQX5 325 aaPredicted RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 C1orf109Q9NX04 203 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 PIPOXQ9P0Z9 390 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ZNF629Q9UEG4 869 aaPredicted RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ADAMTS5Q9UNA0 930 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 BCAT2O15382 392 aaPredicted RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SCN2BO60939 215 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ANXA9O76027 345 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 OTCP00480 354 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ESR1P03372 595 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SEMG1P04279 462 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 HIST1H2ABP04908 130 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 BPIP17213 487 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 NMBRP28336 390 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 IDH2P48735 452 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 HTRA4P83105 476 aaPredicted RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SEMG2Q02383 582 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 C1DQ13901 141 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 HNF4GQ14541 408 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 SLC14A2Q15849 920 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 PYY3Q5JQD4 70 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CLEC2AQ6UVW9 174 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 LCLAT1Q6UWP7 414 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 Q6ZPB1 254 aaPredicted RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 HIST3H2AQ7L7L0 130 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CALHM3Q86XJ0 350 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 NKAIN3Q8N8D7 197 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 GATAD2BQ8WXI9 593 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 HSD17B8Q92506 261 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 TM9SF4Q92544 642 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 HIST1H2ACQ93077 130 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 TSPAN17Q96FV3 270 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 ZNF558Q96NG5 402 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 CASD1Q96PB1 797 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 POLR2J2Q9GZM3 115 aaKnown RBP10.19□□□□□ -0.78
LINC00342-202ENST00000448494 TGIF2Q9GZN2 237 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 MTG2Q9H4K7 406 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 PDLIM7Q9NR12 457 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 GLRX2Q9NS18 164 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 GSTK1Q9Y2Q3 226 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 MMACHCQ9Y4U1 282 aa10.19□□□□□ -0.78
LINC00342-202ENST00000448494 MICAL3Q7RTP6 2002 aa10.18□□□□□ -0.78
LINC00342-202ENST00000448494 HNRNPDLO14979 420 aaKnown RBP10.18□□□□□ -0.78
LINC00342-202ENST00000448494 ALPIP09923 528 aa10.18□□□□□ -0.78
LINC00342-202ENST00000448494 UBBP0CG47 229 aa10.18□□□□□ -0.78
LINC00342-202ENST00000448494 UBCP0CG48 685 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms