RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 DNASE1L3Q13609 305 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 RGS21Q2M5E4 152 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 CCNJQ5T5M9 372 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 FRMPD2BQ6IN97 320 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 VN1R4Q7Z5H5 301 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 OR4N4Q8N0Y3 316 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 C2orf42Q9NWW7 574 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 POFUT2Q9Y2G5 429 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 GPR52Q9Y2T5 361 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 TICRRQ7Z2Z1 1910 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 SMIM30A4D0T7 59 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 GSAPA4D1B5 854 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 E9PQ18 207 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 H3BQ06 376 aaPredicted RBP13.95□□□□□ -0.18
SF1-211ENST00000448404 CACNB4O00305 520 aaPredicted RBP13.95□□□□□ -0.18
SF1-211ENST00000448404 ZIC2O95409 532 aaPredicted RBP13.95□□□□□ -0.18
SF1-211ENST00000448404 CTHP32929 405 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 CHRNEQ04844 493 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 ENPP2Q13822 863 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 PODNL1Q6PEZ8 512 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 SHFQ7M4L6 423 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 ADCK1Q86TW2 530 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 OR2L8Q8NGY9 312 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 ZNF675Q8TD23 568 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 BMFQ96LC9 184 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 POLMQ9NP87 494 aaPredicted RBP13.95□□□□□ -0.18
SF1-211ENST00000448404 FTSJ1Q9UET6 329 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 ITGB1BP2Q9UKP3 347 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 MKLN1Q9UL63 735 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 OR2W5A6NFC9 320 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 PRICKLE3O43900 615 aaPredicted RBP13.94□□□□□ -0.18
SF1-211ENST00000448404 SULT1C4O75897 302 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 SOX3P41225 446 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CRISP1P54107 249 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 COLEC12Q5KU26 742 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CLEC12AQ5QGZ9 265 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 FAM111BQ6SJ93 734 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 IQCHQ86VS3 1027 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 AMIGO1Q86WK6 493 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 TCEANCQ8N8B7 351 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 SCAIQ8N9R8 606 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 MRGPRX1Q96LB2 322 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 REV1Q9UBZ9 1251 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 A4GNTQ9UNA3 340 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 MAPRE3Q9UPY8 281 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 PCDHGB1Q9Y5G3 927 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 NPIPA5A0A0B4J1W7 369 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 NPIPA7E9PJI5 369 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 AIREO43918 545 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CDK1P06493 297 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 NPIPA8P0DM63 369 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 ITGA2P17301 1181 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 AVPR1BP47901 424 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 KCNJ5P48544 419 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 RAB15P59190 212 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 C1orf61Q13536 156 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 PRRT3Q5FWE3 981 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 DEFB119Q8N690 84 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 OR5T3Q8NGG3 340 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CNDP2Q96KP4 475 aaKnown RBP13.94□□□□□ -0.18
SF1-211ENST00000448404 RBCK1Q9BYM8 510 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 PLA2G12AQ9BZM1 189 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 EGLN3Q9H6Z9 239 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 NEUROD4Q9HD90 331 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 TVP23BQ9NYZ1 205 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CNIH4Q9P003 139 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CAB39Q9Y376 341 aaPredicted RBP13.94□□□□□ -0.18
SF1-211ENST00000448404 TRIOBPQ9H2D6 2365 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CPSF4LA6NMK7 179 aaKnown RBP13.94□□□□□ -0.18
SF1-211ENST00000448404 CLEC3AO75596 197 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CH25HO95992 272 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 POU2F2P09086 479 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 NDUFV2P19404 249 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 GRK3P35626 688 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 CXCR4P61073 352 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 TRIM16LQ309B1 348 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 ARMCX4Q5H9R4 360 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 DCST1Q5T197 706 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 RPLP0P6Q8NHW5 317 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 DYNC2LI1Q8TCX1 351 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 HMGB4Q8WW32 186 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 ZHX1-C8orf76Q96EF9 292 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 C6orf62Q9GZU0 229 aaPredicted RBP13.94□□□□□ -0.18
SF1-211ENST00000448404 DCSTAMPQ9H295 470 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 DSN1Q9H410 356 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 A4GALTQ9NPC4 353 aa13.94□□□□□ -0.18
SF1-211ENST00000448404 NDUFB5O43674 189 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 LDB3O75112 727 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 IFNA14P01570 189 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 H1F0P07305 194 aaKnown RBP13.93□□□□□ -0.18
SF1-211ENST00000448404 RCVRNP35243 200 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 RFX3P48380 749 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 KCNC4Q03721 635 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 CARTPTQ16568 116 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 DEFB110Q30KQ9 67 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 PGBD2Q6P3X8 592 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 ZER1Q7Z7L7 766 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 SLC16A11Q8NCK7 471 aa13.93□□□□□ -0.18
SF1-211ENST00000448404 SLC6A18Q96N87 628 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms