RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CTRB1P17538 263 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CKMT2P17540 419 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 IMPDH1P20839 514 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 BGNP21810 368 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CBLP22681 906 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ME2P23368 584 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 GLRA2P23416 452 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 DGKAP23743 735 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ADORA1P30542 326 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 RRM2P31350 389 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 HPCAL1P37235 193 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 GP5P40197 560 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 FMO5P49326 533 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 HOXA1P49639 335 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 NUDT2P50583 147 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF132P52740 706 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 NME5P56597 212 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 RPS18P62269 152 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CTAG1AP78358 180 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 MRPS22P82650 360 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PRKCZQ05513 592 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 EEF1A2Q05639 463 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CDC20Q12834 499 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 TRAP1Q12931 704 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PPIL2Q13356 520 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PPIGQ13427 754 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 SELPLGQ14242 412 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 SQLEQ14534 574 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF273Q14593 569 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 RFTN1Q14699 578 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 KIR2DS3Q14952 304 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 TSC22D1Q15714 1073 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CHI3L2Q15782 390 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 IL17AQ16552 155 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 KNOP1Q1ED39 458 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZFP69Q49AA0 526 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF585BQ52M93 769 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 SIRPB2Q5JXA9 342 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PPM1LQ5SGD2 360 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PDSS1Q5T2R2 415 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 C6orf52Q5T4I8 152 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 LIN9Q5TKA1 542 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CTRB2Q6GPI1 263 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PRR27Q6MZM9 219 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 IYDQ6PHW0 289 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ABRAXAS1Q6UWZ7 409 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 IDO2Q6ZQW0 420 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZBTB49Q6ZSB9 765 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 GALNTL5Q7Z4T8 443 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ADCK2Q7Z695 626 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ADAMTSL2Q86TH1 951 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC9B2Q86UD5 537 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 C12orf56Q8IXR9 622 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 DEFB107AQ8IZN7 70 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PGAM4Q8N0Y7 254 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF786Q8N393 782 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PARP8Q8N3A8 854 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZCCHC7Q8N3Z6 543 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 METTL27Q8N6F8 245 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 LEMD2Q8NC56 503 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CD101Q93033 1021 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 EEF2KMTQ96G04 330 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 C17orf77Q96MU5 243 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 FAM111AQ96PZ2 611 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 RANBP9Q96S59 729 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 AGPAT1Q99943 283 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ADPGKQ9BRR6 497 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 C9orf16Q9BUW7 83 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 DNAI2Q9GZS0 605 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 RPF2Q9H7B2 306 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 GPN2Q9H9Y4 310 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 EFCAB1Q9HAE3 211 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 CXorf21Q9HAI6 301 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 MRPL47Q9HD33 250 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 TCF7L2Q9NQB0 619 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ABT1Q9ULW3 272 aaKnown RBP4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 PADI2Q9Y2J8 665 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 LIPGQ9Y5X9 500 aa4.1□□□□□ -1.75
HMGB1P16-201ENST00000447155 ITGB4P16144 1822 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 BAZ2BQ9UIF8 2168 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 C1orf232A0A0U1RR37 186 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZSCAN5BA6NJL1 495 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SDR42E2A6NKP2 422 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 KPNA7A9QM74 516 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 PSMD11O00231 422 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CLDN4O14493 209 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 STX7O15400 261 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 KCNAB3O43448 404 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CTSVO60911 334 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 DDHD2O94830 711 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CPNE6O95741 557 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SNRPAP09012 282 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 COX4I1P13073 169 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CD40LGP29965 261 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC6A6P31641 620 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 CCKARP32238 428 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 MARCKSL1P49006 195 aa4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 TUFMP49411 452 aaKnown RBP4.09□□□□□ -1.75
HMGB1P16-201ENST00000447155 NPY4RP50391 375 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms