RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 UQCRFS1P1P0C7P4 283 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GNB3P16520 340 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 HNF1AP20823 631 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GALP22466 123 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GLRA1P23415 457 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 CEACAM8P31997 349 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 CCR1P32246 355 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 PPT1P50897 306 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 HSPA2P54652 639 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GPR17Q13304 367 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 PLD1Q13393 1074 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 EXOSC2Q13868 293 aaKnown RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 HSP90AB3PQ58FF7 597 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 PHYHD1Q5SRE7 291 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 LCN1P1Q5VSP4 162 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 FIP1L1Q6UN15 594 aaKnown RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 RFPL4BQ6ZWI9 263 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 FCRLAQ7L513 359 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 NOTCH2NLQ7Z3S9 236 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 NANOGNBQ7Z5D8 188 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 WDR49Q8IV35 697 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 UBQLNLQ8IYU4 475 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 CCDC185Q8N715 623 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 TRMT10AQ8TBZ6 339 aaKnown RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 AGR3Q8TD06 166 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 RAET1EQ8TD07 263 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GPR148Q8TDV2 347 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 TCP11Q8WWU5 503 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 SMPDL3AQ92484 453 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 NR4A3Q92570 626 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF75CPQ92670 426 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GIMAP5Q96F15 307 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 COG3Q96JB2 828 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 C10orf90Q96M02 699 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GSDMCQ9BYG8 508 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 NLNQ9BYT8 704 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GPR61Q9BZJ8 451 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 RPAP3Q9H6T3 665 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 KAT8Q9H7Z6 458 aaKnown RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 YY1AP1Q9H869 796 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 FN3KRPQ9HA64 309 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 CRLF2Q9HC73 371 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 S100A14Q9HCY8 104 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 APMAPQ9HDC9 416 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF71Q9NQZ8 489 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GDAP2Q9NXN4 497 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 PRDM4Q9UKN5 801 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 NIP7Q9Y221 180 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF175Q9Y473 711 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 DIP2BQ9P265 1576 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 KIF7Q2M1P5 1343 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 A0A0G2JLW4 131 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 GOLGA8OA6NCC3 632 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 WASH3PC4AMC7 463 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 GOLGA8NF8WBI6 632 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CLDN5O00501 218 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CCSO14618 274 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 B4GAT1O43505 415 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 GLRA3O75311 464 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 SAP30O75446 220 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CDK2AP2O75956 126 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 NEBLO76041 1014 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 DFFBO76075 338 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ANP32DO95626 131 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF44P15621 663 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 TSPAN8P19075 237 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 NCF2P19878 526 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 MATKP42679 507 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CEBPDP49716 269 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CRIP2P52943 208 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 PRRX1P54821 245 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 HERV-K104P61576 105 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 PPIAP62937 165 aaKnown RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 NAAAQ02083 359 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMED1Q13445 227 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 P2RY14Q15391 338 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 EXOC3L2Q2M3D2 409 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 TMEM30BQ3MIR4 351 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF876PQ49A33 203 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ACSF3Q4G176 576 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 GLIPR1L2Q4G1C9 344 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CAVIN4Q5BKX8 364 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 XKR6Q5GH73 641 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ATF7IP2Q5U623 682 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 GFI1BQ5VTD9 330 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 PYHIN1Q6K0P9 492 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 WASH2PQ6VEQ5 465 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 DPY19L2P2Q6ZN68 376 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 PIGZQ86VD9 579 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 GPBP1Q86WP2 473 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 NBPF5PQ86XG9 351 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CACUL1Q86Y37 369 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 CCDC36Q8IYA8 594 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 TTC5Q8N0Z6 440 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 FAM89BQ8N5H3 189 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ARFGAP2Q8N6H7 521 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 ANKFN1Q8N957 763 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 DDHD1Q8NEL9 900 aa3.86□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR6C4Q8NGE1 309 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms