RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 GNA13Q14344 377 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 CEBPEQ15744 281 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 SSX1Q16384 188 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 PRAMEF8Q5VWM4 474 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 PRAMEF7Q5VXH5 474 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 TUBA3EQ6PEY2 450 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 TMEM107Q6UX40 140 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 MORN4Q8NDC4 146 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 SRFBP1Q8NEF9 429 aaKnown RBP16.79■□□□□ 0.28
CLDN9-201ENST00000445369 OR8J1Q8NGP2 316 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 NEURL2Q9BR09 285 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 TRNAU1APQ9NX07 287 aaKnown RBP16.79■□□□□ 0.28
CLDN9-201ENST00000445369 KLHL20Q9Y2M5 609 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 HEBP2Q9Y5Z4 205 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 TRANK1O15050 2925 aa16.79■□□□□ 0.28
CLDN9-201ENST00000445369 A0A0G2JPF8 293 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 HNRNPCL2B2RXH8 293 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 HNRNPCL3B7ZW38 293 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 TAF4O00268 1085 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 ARHGAP33O14559 1287 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 C8orf89P0DMQ9 161 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 HNRNPCL4P0DMR1 293 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 PORP16435 677 aaPredicted RBP16.78■□□□□ 0.28
CLDN9-201ENST00000445369 CSNK2A2P19784 350 aaPredicted RBP16.78■□□□□ 0.28
CLDN9-201ENST00000445369 MMP11P24347 488 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 PBX2P40425 430 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 RAB8AP61006 207 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 COX10Q12887 443 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 NDUFA9Q16795 377 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 TIMM50Q3ZCQ8 353 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 TMEM196Q5HYL7 178 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 MFSD4BQ5TF39 518 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 PLEKHG7Q6ZR37 379 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 ZER1Q7Z7L7 766 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 HMGN2P46Q86SG4 172 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 LINC00471Q8N535 108 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 OR4K5Q8NGD3 323 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 JPH3Q8WXH2 748 aaPredicted RBP16.78■□□□□ 0.28
CLDN9-201ENST00000445369 KLHL6Q8WZ60 621 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 OPALINQ96PE5 141 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 OR2M4Q96R27 311 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 PINK1Q9BXM7 581 aa16.78■□□□□ 0.28
CLDN9-201ENST00000445369 C6orf62Q9GZU0 229 aaPredicted RBP16.78■□□□□ 0.28
CLDN9-201ENST00000445369 PRSS38A1L453 326 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 LINC01565O15544 149 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 PROM1O43490 865 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 DNTTP04053 509 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 ALOX5P09917 674 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 CSTF2P33240 577 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLDN9-201ENST00000445369 PPP2CBP62714 309 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 PPP2CAP67775 309 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 ZNF91Q05481 1191 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 OCLNQ16625 522 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 TCEANCQ8N8B7 351 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 C16orf58Q96GQ5 468 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 GABRG3Q99928 467 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 TRMT61BQ9BVS5 477 aaKnown RBP16.77■□□□□ 0.28
CLDN9-201ENST00000445369 PBX4Q9BYU1 374 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 KCNE3Q9Y6H6 103 aa16.77■□□□□ 0.28
CLDN9-201ENST00000445369 SLC31A1O15431 190 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 EMC8O43402 210 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 KDM1AO60341 852 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 CHRM5P08912 532 aaPredicted RBP16.77■□□□□ 0.27
CLDN9-201ENST00000445369 TNNI3P19429 210 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 NTSR1P30989 418 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 BUD31P41223 144 aaPredicted RBP16.77■□□□□ 0.27
CLDN9-201ENST00000445369 STXBP1P61764 594 aaKnown RBP16.77■□□□□ 0.27
CLDN9-201ENST00000445369 PRR5P85299 388 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 NCF4Q15080 339 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 GPAT3Q53EU6 434 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 TPRG1LQ5T0D9 272 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 C1orf94Q6P1W5 598 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 IQCHQ86VS3 1027 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 IQCF1Q8N6M8 205 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 IL17RCQ8NAC3 791 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 TMEM80Q96HE8 168 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 ZNF681Q96N22 645 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 OR7D2Q96RA2 312 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 SNX7Q9UNH6 387 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 RPL36Q9Y3U8 105 aaKnown RBP16.77■□□□□ 0.27
CLDN9-201ENST00000445369 COLEC10Q9Y6Z7 277 aa16.77■□□□□ 0.27
CLDN9-201ENST00000445369 GOLGA4Q13439 2230 aaKnown RBP16.77■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3DA0A087WVF3 549 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3IA0A087WXS9 549 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3EA0A087X179 549 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3KA0A087X1G2 549 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3FA6NER0 549 aaPredicted RBP16.76■□□□□ 0.27
CLDN9-201ENST00000445369 ISM1B1AKI9 464 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3LB9A6J9 549 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 KIAA0513O60268 411 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TPST2O60704 377 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 UPK1BO75841 260 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 SCG5P05408 212 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 ASGR2P07307 311 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3HP0C7X1 549 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 LAMP2P13473 410 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 MC3RP41968 323 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 LSM11P83369 360 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLDN9-201ENST00000445369 RNLSQ5VYX0 342 aa16.76■□□□□ 0.27
CLDN9-201ENST00000445369 TBC1D3GQ6DHY5 549 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms