RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 VPS50Q96JG6 964 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 WDR77Q9BQA1 342 aaPredicted RBP16.03■□□□□ 0.16
LIME1-202ENST00000444951 RMND5AQ9H871 391 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 TMEM45AQ9NWC5 275 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 MAT2BQ9NZL9 334 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 BCAP29Q9UHQ4 241 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 PCSK5Q92824 1860 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 ASPDHA6ND91 283 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 SYNDIG1LA6NDD5 238 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 ARGFXA6NJG6 315 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 PCDH17O14917 1159 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 ANP32DO95626 131 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 CELA2AP08217 269 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 COX4I1P13073 169 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.16
LIME1-202ENST00000444951 SSTR4P31391 388 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 FRKP42685 505 aaPredicted RBP16.02■□□□□ 0.16
LIME1-202ENST00000444951 PRKAG1P54619 331 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 HBA1P69905 142 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 MGAT2Q10469 447 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 CYLC2Q14093 348 aaPredicted RBP16.02■□□□□ 0.16
LIME1-202ENST00000444951 MMEL1Q495T6 779 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 TRMT12Q53H54 448 aaKnown RBP16.02■□□□□ 0.16
LIME1-202ENST00000444951 ZNF628Q5EBL2 1059 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 CPZQ66K79 652 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 FITM2Q8N6M3 262 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 SIMC1Q8NDZ2 872 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 OR7G2Q8NG99 324 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 OR5AK3PQ8NH89 298 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 SLC2A12Q8TD20 617 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 NCLNQ969V3 563 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 SENP5Q96HI0 755 aaPredicted RBP16.02■□□□□ 0.16
LIME1-202ENST00000444951 ITCHQ96J02 903 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 PANX1Q96RD7 426 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 SLC25A23Q9BV35 468 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 CXorf36Q9H7Y0 433 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 IL1RL2Q9HB29 575 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 NDUFAF1Q9Y375 327 aa16.02■□□□□ 0.16
LIME1-202ENST00000444951 A0A1W2PP18 115 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 CLEC18AA5D8T8 446 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 RFXANKO14593 260 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 SLC22A2O15244 555 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 SCN2BO60939 215 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 NME6O75414 186 aaPredicted RBP16.01■□□□□ 0.15
LIME1-202ENST00000444951 DDAH2O95865 285 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 HPP00738 406 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 CDKN2CP42773 168 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 SLC26A5P58743 744 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 MAP4K2Q12851 820 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 KLRB1Q12918 225 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 CHAF1BQ13112 559 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 TLR1Q15399 786 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 PAGE3Q5JUK9 113 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 CLEC18BQ6UXF7 455 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 ZNF621Q6ZSS3 439 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 CLEC18CQ8NCF0 446 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 B3GNT7Q8NFL0 401 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 ELP4Q96EB1 424 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 CCDC115Q96NT0 180 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 IP6K3Q96PC2 410 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 NPAS2Q99743 824 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 TUBB6Q9BUF5 446 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 NUDT9Q9BW91 350 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 SLC52A3Q9NQ40 469 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 DDX18Q9NVP1 670 aaKnown RBP16.01■□□□□ 0.15
LIME1-202ENST00000444951 TAS2R9Q9NYW1 312 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 BTNL2Q9UIR0 455 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 LEF1Q9UJU2 399 aaPredicted RBP16.01■□□□□ 0.15
LIME1-202ENST00000444951 MAN2B2Q9Y2E5 1009 aa16.01■□□□□ 0.15
LIME1-202ENST00000444951 USP9YO00507 2555 aaPredicted RBP16■□□□□ 0.15
LIME1-202ENST00000444951 MKRN2OSH3BPM6 223 aa16■□□□□ 0.15
LIME1-202ENST00000444951 FBP2O00757 339 aa16■□□□□ 0.15
LIME1-202ENST00000444951 GALNSP34059 522 aa16■□□□□ 0.15
LIME1-202ENST00000444951 MLLT10P55197 1068 aa16■□□□□ 0.15
LIME1-202ENST00000444951 MLC1Q15049 377 aa16■□□□□ 0.15
LIME1-202ENST00000444951 SPRED3Q2MJR0 410 aa16■□□□□ 0.15
LIME1-202ENST00000444951 TCTN3Q6NUS6 607 aa16■□□□□ 0.15
LIME1-202ENST00000444951 MSANTD1Q6ZTZ1 278 aa16■□□□□ 0.15
LIME1-202ENST00000444951 ASB18Q6ZVZ8 466 aa16■□□□□ 0.15
LIME1-202ENST00000444951 RETREG3Q86VR2 466 aa16■□□□□ 0.15
LIME1-202ENST00000444951 KIF2BQ8N4N8 673 aa16■□□□□ 0.15
LIME1-202ENST00000444951 MORN4Q8NDC4 146 aa16■□□□□ 0.15
LIME1-202ENST00000444951 NFAM1Q8NET5 270 aaPredicted RBP16■□□□□ 0.15
LIME1-202ENST00000444951 OR52R1Q8NGF1 315 aa16■□□□□ 0.15
LIME1-202ENST00000444951 ZNF675Q8TD23 568 aa16■□□□□ 0.15
LIME1-202ENST00000444951 GTF2H4Q92759 462 aa16■□□□□ 0.15
LIME1-202ENST00000444951 MIB2Q96AX9 1013 aa16■□□□□ 0.15
LIME1-202ENST00000444951 NACC2Q96BF6 587 aa16■□□□□ 0.15
LIME1-202ENST00000444951 FBXL20Q96IG2 436 aa16■□□□□ 0.15
LIME1-202ENST00000444951 ART5Q96L15 291 aa16■□□□□ 0.15
LIME1-202ENST00000444951 IMMP1LQ96LU5 166 aa16■□□□□ 0.15
LIME1-202ENST00000444951 C3orf14Q9HBI5 128 aa16■□□□□ 0.15
LIME1-202ENST00000444951 EQTNQ9NQ60 294 aa16■□□□□ 0.15
LIME1-202ENST00000444951 SERHLQ9NQF3 203 aa16■□□□□ 0.15
LIME1-202ENST00000444951 SIRT3Q9NTG7 399 aaPredicted RBP16■□□□□ 0.15
LIME1-202ENST00000444951 ARL8BQ9NVJ2 186 aa16■□□□□ 0.15
LIME1-202ENST00000444951 COPS7AQ9UBW8 275 aa16■□□□□ 0.15
LIME1-202ENST00000444951 VPS4AQ9UN37 437 aa16■□□□□ 0.15
LIME1-202ENST00000444951 ERVK-11Q9UQG0 969 aa16■□□□□ 0.15
LIME1-202ENST00000444951 TRBV11-1A0A0K0K1C0 115 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms