RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 FEVQ99581 238 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 TMEM27Q9HBJ8 222 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 NME6O75414 186 aaPredicted RBP10.05□□□□□ -0.8
TOP3B-210ENST00000444502 PROS1P07225 676 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 TSPAN19P0C672 248 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 CRISP3P54108 245 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 KHDRBS2Q5VWX1 349 aaKnown RBP10.05□□□□□ -0.8
TOP3B-210ENST00000444502 KIAA1614Q5VZ46 1190 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 LYSMD4Q5XG99 296 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 TRIM46Q7Z4K8 759 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 KLHDC8AQ8IYD2 350 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 CHCHD4Q8N4Q1 142 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 GATSQ8NAP1 163 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 AQP11Q8NBQ7 271 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 GALNT11Q8NCW6 608 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 FAM83FQ8NEG4 500 aaPredicted RBP10.05□□□□□ -0.8
TOP3B-210ENST00000444502 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
TOP3B-210ENST00000444502 MR1Q95460 341 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 ELSPBP1Q96BH3 223 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 PEX11GQ96HA9 241 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 ART5Q96L15 291 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 FBRSQ9HAH7 460 aa10.05□□□□□ -0.8
TOP3B-210ENST00000444502 TDRD15B5MCY1 1934 aaKnown RBP10.05□□□□□ -0.8
TOP3B-210ENST00000444502 UNC13CQ8NB66 2214 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 ASPDHA6ND91 283 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 EFCAB10A6NFE3 127 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SLC1A7O00341 560 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 DUX1O43812 170 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 B4GALNT1Q00973 533 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SNAPC1Q16533 368 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 GARNL3Q5VVW2 1013 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SLC44A3Q8N4M1 653 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 GRHL3Q8TE85 626 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 C16orf78Q8WTQ4 265 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 KCNS3Q9BQ31 491 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 C1QTNF3Q9BXJ4 246 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 POLR2J3Q9H1A7 115 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 DSN1Q9H410 356 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 NUFIP1Q9UHK0 495 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 BDP1A6H8Y1 2624 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 NARSO43776 548 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 RETP07949 1114 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PPP5CP53041 499 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 MAZP56270 477 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 RAB25P57735 213 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SMIM11AP58511 58 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PFN3P60673 137 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 GPLD1P80108 840 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 UGT8Q16880 541 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 CLVS2Q5SYC1 327 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 TPRG1LQ5T0D9 272 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SFTPA1Q8IWL2 248 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 ZZZ3Q8IYH5 903 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SAMD14Q8IZD0 417 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 TEX47Q8TBZ9 253 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 ZNF707Q96C28 371 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PDXPQ96GD0 296 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 DOHHQ9BU89 302 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 DCSTAMPQ9H295 470 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 C6orf106Q9H6K1 298 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 GORASP2Q9H8Y8 452 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SLC25A37Q9NYZ2 338 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SPATA2Q9UM82 520 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 FAM221BA6H8Z2 402 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 MCIDASD6RGH6 385 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PCSK2P16519 638 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 AHCYP23526 432 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 IGFALSP35858 605 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SHC2P98077 582 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 RGNQ15493 299 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 KIAA1211LQ6NV74 962 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PTRH1Q86Y79 214 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 GEMIN6Q8WXD5 167 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 TANKQ92844 425 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SLC6A18Q96N87 628 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 TEFMQ96QE5 360 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 CPPED1Q9BRF8 314 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 CDADC1Q9BWV3 514 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 TBL1XR1Q9BZK7 514 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 FGF22Q9HCT0 170 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 MBD1Q9UIS9 605 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 MRTO4Q9UKD2 239 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 EFCAB9A8MZ26 197 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 M0R129 80 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 POLR1CO15160 346 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 C7P10643 843 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 HSD3B1P14060 373 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 NDUFV2P19404 249 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 HSD3B2P26439 372 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 NKX3-2P78367 333 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 MXD1Q05195 221 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 NPRL3Q12980 569 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 CAMK1Q14012 370 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 CDK10Q15131 360 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SMN1Q16637 294 aaKnown RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 EXOC3L2Q2M3D2 409 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 TMEM196Q5HYL7 178 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms