RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 QPCTLQ9NXS2 382 aa17.33■□□□□ 0.36
ATPAF2-201ENST00000444058 CNOT11Q9UKZ1 510 aaKnown RBP17.33■□□□□ 0.36
ATPAF2-201ENST00000444058 NOTCH2Q04721 2471 aa17.33■□□□□ 0.36
ATPAF2-201ENST00000444058 ACOX3O15254 700 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 SUSD5O60279 629 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 BCAS2O75934 225 aaPredicted RBP17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 TPOP07202 933 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 PRPH2P23942 346 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 SOX18P35713 384 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 MAGEA5P43359 124 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 DCAF7P61962 342 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 RPP38P78345 283 aaKnown RBP17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 ZNF763Q0D2J5 394 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 SLC10A1Q14973 349 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 PCLAFQ15004 111 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 IMPG1Q17R60 797 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 SPDYAQ5MJ70 313 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 FAM111BQ6SJ93 734 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 C10orf107Q8IVU9 208 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 MREGQ8N565 214 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 HSPBAP1Q96EW2 488 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 TMEM109Q9BVC6 243 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 TP63Q9H3D4 680 aaPredicted RBP17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 PROK2Q9HC23 129 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 CHST11Q9NPF2 352 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 SLC35C2Q9NQQ7 365 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 TAS2R7Q9NYW3 318 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 PRODH2Q9UF12 536 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 NBPF19A0A087WUL8 3843 aa17.32■□□□□ 0.36
ATPAF2-201ENST00000444058 PRSS44E7EML9 344 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 HCN1O60741 890 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 PDE9AO76083 593 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 SNX4O95219 450 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 CBX7O95931 251 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 DDCP20711 480 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 DRD5P21918 477 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 PSPHP78330 225 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 DUSP2Q05923 314 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 BTKQ06187 659 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 ZNF630Q2M218 657 aaPredicted RBP17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 ZNF628Q5EBL2 1059 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 SCIMPQ6UWF3 145 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 TRILQ7L0X0 811 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 CD163Q86VB7 1156 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 SPPL2AQ8TCT8 520 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 DIO2Q92813 273 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 LCORQ96JN0 433 aaPredicted RBP17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 GATA5Q9BWX5 397 aaPredicted RBP17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 ZNF703Q9H7S9 590 aaPredicted RBP17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 ACKR4Q9NPB9 350 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 MYNNQ9NPC7 610 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 BCAP29Q9UHQ4 241 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 CCL27Q9Y4X3 112 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 CENPEQ02224 2701 aa17.31■□□□□ 0.36
ATPAF2-201ENST00000444058 NCOA6Q14686 2063 aaPredicted RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 AQP7O14520 342 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 BCKDKO14874 412 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 ZNHIT1O43257 154 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 HNRNPRO43390 633 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 TRIM3O75382 744 aaPredicted RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 SLITRK5O94991 958 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 FGF4P08620 206 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 ABCD3P28288 659 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 MPIP34949 423 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 PPICP45877 212 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 EMDP50402 254 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 DUSP8Q13202 625 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 TRMT12Q53H54 448 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 PRAMEF20Q5VT98 475 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 SP5Q6BEB4 398 aaPredicted RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 ZNF787Q6DD87 383 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 TMEM211Q6ICI0 200 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 TMEM81Q6P7N7 255 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 IKBIPQ70UQ0 350 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 SRRM1Q8IYB3 904 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 CCDC116Q8IYX3 515 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 ADCY4Q8NFM4 1077 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 EXOSC8Q96B26 276 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 SMC6Q96SB8 1091 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 DOHHQ9BU89 302 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 EBPLQ9BY08 206 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 ANGPTL4Q9BY76 406 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 NXF5Q9H1B4 397 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 TNFRSF12AQ9NP84 129 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 B4GALT7Q9UBV7 327 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 DTX4Q9Y2E6 619 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 PCNX1Q96RV3 2341 aa17.3■□□□□ 0.36
ATPAF2-201ENST00000444058 ATP6AP2A0A1C7CYW4 349 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 LRRC3CA6NJW4 275 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 SLC28A1O00337 649 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 AZIN1O14977 448 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 TO15178 435 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 PLOD3O60568 738 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 PPM1BO75688 479 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 ATP6AP2O75787 350 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 CLDN14O95500 239 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 ABCB1P08183 1280 aaPredicted RBP17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 FBXW4P57775 412 aa17.29■□□□□ 0.36
ATPAF2-201ENST00000444058 EXOSC7Q15024 291 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms