RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 NSUN3Q9H649 340 aaKnown RBP11.09□□□□□ -0.63
CCBE1-202ENST00000439986 MMP20O60882 483 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 PIM1P11309 404 aaPredicted RBP11.09□□□□□ -0.63
CCBE1-202ENST00000439986 MAP2K4P45985 399 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 SELENOVP59797 346 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 GPM6BQ13491 265 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 NHSL2Q5HYW2 709 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 KCTD9Q7L273 389 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 GATSQ8NAP1 163 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 OR6C4Q8NGE1 309 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 NCSTNQ92542 709 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 NXPE2Q96DL1 559 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 ARHGAP9Q9BRR9 750 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 SMOC2Q9H3U7 446 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 UTS2RQ9UKP6 389 aa11.09□□□□□ -0.63
CCBE1-202ENST00000439986 SOX14O95416 240 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 PRPS1L1P21108 318 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 GNG10P50151 68 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 ABHD18Q0P651 414 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 ZNF648Q5T619 568 aaPredicted RBP11.08□□□□□ -0.63
CCBE1-202ENST00000439986 C1orf185Q5T7R7 199 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 PLA2G15Q8NCC3 412 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 NLGN2Q8NFZ4 835 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 LRCH3Q96II8 777 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 CAPNS2Q96L46 248 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 COL21A1Q96P44 957 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 SLC2A13Q96QE2 648 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 GMLQ99445 158 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 BEX1Q9HBH7 125 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 ITM2CQ9NQX7 267 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.08□□□□□ -0.63
CCBE1-202ENST00000439986 FNIP2Q9P278 1114 aa11.08□□□□□ -0.63
CCBE1-202ENST00000439986 POM121BA6NF01 834 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 HOXC13P31276 330 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 MPIP34949 423 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 GRIA2P42262 883 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 C19orf57Q0VDD7 668 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 PTGR1Q14914 329 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 CRB2Q5IJ48 1285 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ADGRF1Q5T601 910 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 KIAA1614Q5VZ46 1190 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 FUNDC1Q8IVP5 155 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 BATF2Q8N1L9 274 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ACBD4Q8NC06 268 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ASB11Q8WXH4 323 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 KLHL6Q8WZ60 621 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ZBED6CLQ96FA7 236 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 RANBP9Q96S59 729 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 METTL7AQ9H8H3 244 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 NIT2Q9NQR4 276 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 AIG1Q9NVV5 245 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 AKAP11Q9UKA4 1901 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ARGFXA6NJG6 315 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 GLOD5A6NK44 160 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 SEC14L6B5MCN3 397 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 KCNJ13O60928 360 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 LDOC1O95751 146 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 CHRNA1P02708 482 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ADH5P11766 374 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 CLCNKAP51800 687 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 SNU13P55769 128 aaKnown RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 RELAQ04206 551 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 TMED4Q7Z7H5 227 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 KLHL36Q8N4N3 616 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 TSNAXQ99598 290 aaKnown RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 IL1RAPQ9NPH3 570 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 LYARQ9NX58 379 aaKnown RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 TRAV6A0A075B6T7 132 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 SCDO00767 359 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 PIP5K1CO60331 668 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 S100A8P05109 93 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 MRPL3P09001 348 aaKnown RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 CAPN3P20807 821 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 AGXTP21549 392 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 MAOBP27338 520 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 GKP32189 559 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 PITPNAQ00169 270 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ELOAQ14241 798 aaKnown RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 VMACQ2NL98 169 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 GXYLT1Q4G148 440 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ARL9Q6T311 187 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 GDPD4Q6W3E5 623 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 GPALPP1Q8IXQ4 340 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 C9orf43Q8TAL5 461 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 DOK4Q8TEW6 326 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 PEX13Q92968 403 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 HSH2DQ96JZ2 352 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ANKRA2Q9H9E1 313 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 FAM120CQ9NX05 1096 aaKnown RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 CALML5Q9NZT1 146 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 MGAT4CQ9UBM8 478 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 SPO11Q9Y5K1 396 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 FXYD6-FXYD2A0A087WZ82 144 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 A0A0G2JLL6 359 aaPredicted RBP11.08□□□□□ -0.64
CCBE1-202ENST00000439986 PRSS51A0A1B0GVH4 220 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 CNTN5O94779 1100 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 SH3BP2P78314 561 aa11.08□□□□□ -0.64
CCBE1-202ENST00000439986 ZNF517Q6ZMY9 492 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms