RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 TP53BP1Q12888 1972 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 TEX13CA0A0J9YWL9 993 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 ETHE1O95571 254 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 KLK1P06870 262 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 H1F0P07305 194 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 HOXD4P09016 255 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 PCGF2P35227 344 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 BUD31P41223 144 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 NUBP1P53384 320 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 ATP12AP54707 1039 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 TAS2R50P59544 299 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 RPS7P62081 194 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 EEF1A1P68104 462 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 FABP5Q01469 135 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 EEF1A2Q05639 463 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 EXOSC2Q13868 293 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 LTB4RQ15722 352 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CCL14Q16627 93 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 EEF1A1P5Q5VTE0 462 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 HSDL2Q6YN16 418 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 TPGS1Q6ZTW0 290 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 TSEN54Q7Z6J9 526 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 IQCHQ86VS3 1027 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF683Q8IZ20 524 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 NANSQ9NR45 359 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 RLFQ13129 1914 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 A0A0G2JN53 185 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 IQCMA0A1B0GVH7 501 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 A0A1W2PRB8 838 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 LGALS8O00214 317 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 GATBO75879 557 aaKnown RBP11.09□□□□□ -0.63
SMPD4-209ENST00000439886 OSMP13725 252 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 ACRV1P26436 265 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 AOAHP28039 575 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 VIPR1P32241 457 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 CD79BP40259 229 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 PREPP48147 710 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 MEOX2P50222 304 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 CDH4P55283 916 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 PTSQ03393 145 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 GPR176Q14439 515 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 HES5Q5TA89 166 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 THOC6Q86W42 341 aaKnown RBP11.09□□□□□ -0.63
SMPD4-209ENST00000439886 NANOGP1Q8N7R0 232 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 CA5BP1Q8WTZ4 195 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 SLC13A4Q9UKG4 626 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 EXO1Q9UQ84 846 aaKnown RBP11.09□□□□□ -0.63
SMPD4-209ENST00000439886 A0A0G2JMZ2 1700 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 CACNA1CQ13936 2221 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 PRAMEF25A6NGN4 478 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 M0R233 179 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 M0R3H8 397 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 HCN1O60741 890 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 PRAMEF4O60810 478 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 CLDN11O75508 207 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 PEPDP12955 493 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 GIFP27352 417 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 SPAM1P38567 509 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 CPT1AP50416 773 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 TSPAN5P62079 268 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.636e-6■□□□□ 10.9
SMPD4-209ENST00000439886 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-209ENST00000439886 MLLT11Q13015 90 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 GPRC6AQ5T6X5 926 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 PRAMEF9Q5VWM5 478 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 GDPGP1Q6ZNW5 385 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 MAMDC2Q7Z304 686 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-209ENST00000439886 KLBQ86Z14 1044 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 MMP21Q8N119 569 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 C9orf62Q8N4C0 152 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 OR4F15Q8NGB8 312 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 OR52I1Q8NGK6 324 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 C8orf33Q9H7E9 229 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-209ENST00000439886 SYNDIG1Q9H7V2 258 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF236Q9UL36 1845 aa11.09□□□□□ -0.63
SMPD4-209ENST00000439886 A0A0G2JPF8 293 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 DRGXA6NNA5 263 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 ZAR1LA6NP61 321 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 HNRNPCL3B7ZW38 293 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SMAD6O43541 496 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 S100A9P06702 114 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 HNRNPCL4P0DMR1 293 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 GABRB1P18505 474 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 CXCL3P19876 107 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 PTX3P26022 381 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 BDKRB1P46663 353 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 CCR6P51684 374 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 WNT4P56705 351 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 EIF4EBP2Q13542 120 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SF3A2Q15428 464 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SEC23BQ15437 767 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SFRP4Q6FHJ7 346 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF730Q6ZMV8 503 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms