RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 RPL6Q02878 288 aaKnown RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 LSAMPQ13449 338 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 RAB39AQ14964 217 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 GPAT3Q53EU6 434 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 ATAD3BQ5T9A4 648 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF770Q6IQ21 691 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 HEPHL1Q6MZM0 1159 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 CDC73Q6P1J9 531 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 SLC36A4Q6YBV0 504 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 PRSS41Q7RTY9 318 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 B3GNT8Q7Z7M8 397 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 CCDC71Q8IV32 467 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 SPARTQ8N0X7 666 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 TAGAPQ8N103 731 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 CA13Q8N1Q1 262 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 ARHGEF39Q8N4T4 335 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 OR9Q2Q8NGE9 314 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 OR4D11Q8NGI4 311 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 C1orf216Q8TAB5 229 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF420Q8TAQ5 688 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 ZFAND2BQ8WV99 257 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 OTUB1Q96FW1 271 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 SPACA7Q96KW9 195 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 PINK1Q9BXM7 581 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 SLC38A1Q9H2H9 487 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 TBC1D17Q9HA65 648 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF556Q9HAH1 456 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 FAM60AQ9NP50 221 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 TMEM74BQ9NUR3 256 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 DOLKQ9UPQ8 538 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 SLC9A8Q9Y2E8 581 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 TPRKBQ9Y3C4 175 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 PCDHGA6Q9Y5G7 932 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 KCNE3Q9Y6H6 103 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 TP53BP1Q12888 1972 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 A0A087WV62 115 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SYT5O00445 386 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 MRPS14O60783 128 aaKnown RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SEMA7AO75326 666 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 LGI1O95970 557 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ADAP00813 363 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ATP1B1P05026 303 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 PROS1P07225 676 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 H1F0P07305 194 aaKnown RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FOSL2P15408 326 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ELAVL4P26378 380 aaKnown RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 MAOBP27338 520 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 DCKP27707 260 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SLC5A2P31639 672 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 RAB38P57729 211 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 HNRNPKP61978 463 aaKnown RBP eCLIP11.04□□□□□ -0.643e-7■■■■□ 24.7
SMAD3-202ENST00000439724 CSNK2BP67870 215 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SHC2P98077 582 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 TEKQ02763 1124 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 TUBA3CQ13748 450 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 NEDD8Q15843 81 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 PRTGQ2VWP7 1150 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FAM214AQ32MH5 1076 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF628Q5EBL2 1059 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 EXOSC6Q5RKV6 272 aaKnown RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FHL5Q5TD97 284 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 XAF1Q6GPH4 301 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FAM111BQ6SJ93 734 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 DEF8Q6ZN54 512 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FAM92BQ6ZTR7 304 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 COMTD1Q86VU5 262 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 DNAJC22Q8N4W6 341 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 BPIFB6Q8NFQ5 453 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 VANGL1Q8TAA9 524 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ADAMTS15Q8TE58 950 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SGCDQ92629 289 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 TANKQ92844 425 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 HSPA12BQ96MM6 686 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 NODALQ96S42 347 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 NIPSNAP1Q9BPW8 284 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FUZQ9BT04 418 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 DUSP21Q9H596 190 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 CXorf21Q9HAI6 301 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 NMNAT1Q9HAN9 279 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 EQTNQ9NQ60 294 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 PAK1IP1Q9NWT1 392 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SCN3BQ9NY72 215 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 TMCC3Q9ULS5 477 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 C19orf53Q9UNZ5 99 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 EML5Q05BV3 1969 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 NINQ8N4C6 2090 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 TRBV4-1A0A0J9YWV2 114 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SLC9B1P1A6NJY1 282 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 LMO7DNF2Z398 122 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FAAHO00519 579 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 AQP9O43315 295 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 HCRTR1O43613 425 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FGF17O60258 216 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SRPX2O60687 465 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SEC14L2O76054 403 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 GPR75O95800 540 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 EPPINO95925 133 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms