RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CACNA1CQ13936 2221 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 RPS10-NUDT3A0A1W2PQS6 291 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 A0A1W2PRB8 838 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 OR5K3A6NET4 321 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 GABRPO00591 440 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SGTAO43765 313 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SSNA1O43805 119 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 HCN1O60741 890 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 MT-ND4P03905 459 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 H1F0P07305 194 aaKnown RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 IL3P08700 152 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 CTSOP43234 321 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 AGTRAPQ6RW13 159 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 ZER1Q7Z7L7 766 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 GPC2Q8N158 579 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 CPA6Q8N4T0 437 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 C11orf24Q96F05 449 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SLC6A16Q9GZN6 736 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 ISG20L2Q9H9L3 353 aaKnown RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 C12orf10Q9HB07 376 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 FBXW2Q9UKT8 454 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 DOCK6Q96HP0 2047 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SCN8AQ9UQD0 1980 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 PROM1O43490 865 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SERPINI2O75830 405 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SLC2A10O95528 541 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 STOMP27105 288 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 PDHA2P29803 388 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 TIA1P31483 386 aaKnown RBP eCLIP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 DSTNP60981 165 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 WDR5P61964 334 aaKnown RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 CNTN1Q12860 1018 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 COX10Q12887 443 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SF3A2Q15428 464 aaKnown RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 RTP2Q5QGT7 225 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SLC30A6Q6NXT4 461 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 TRIM40Q6P9F5 258 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 LYPD4Q6UWN0 246 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 QSOX2Q6ZRP7 698 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 TOE1Q96GM8 510 aaKnown RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 GPR137Q96N19 417 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 CLEC4MQ9H2X3 399 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 ERVMER34-1Q9H9K5 563 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 FZD3Q9NPG1 666 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 SPATA6Q9NWH7 488 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-204ENST00000438964 BTNL2Q9UIR0 455 aa12.66□□□□□ -0.38
ACTN1-204ENST00000438964 TEX13CA0A0J9YWL9 993 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ANHXE9PGG2 379 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 QSOX1O00391 747 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 LIMS3P0CW19 117 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 LIMS4P0CW20 117 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 PIPP12273 146 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-204ENST00000438964 PRKAG1P54619 331 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 TEKQ02763 1124 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 SYPL1Q16563 259 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 TUSC1Q2TAM9 212 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 PRSS45Q7RTY3 260 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 C11orf96Q7Z7L8 435 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 OR2T35Q8NGX2 323 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 KAT2AQ92830 837 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 OR6C2Q9NZP2 312 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ANGPT4Q9Y264 503 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 COL4A4P53420 1690 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-204ENST00000438964 LINC00862A6NCI5 91 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 SOD1P00441 154 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 DNASE1P24855 282 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ETV3P41162 512 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 SLC6A11P48066 632 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 GIPRP48546 466 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 SNRPGP62308 76 aaKnown RBP12.65□□□□□ -0.38
ACTN1-204ENST00000438964 EEF1A2Q05639 463 aaKnown RBP12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ILKQ13418 452 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ANXA8L1Q5VT79 327 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 GLB1LQ6UWU2 654 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 TRILQ7L0X0 811 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 MS4A15Q8N5U1 240 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ZNF527Q8NB42 609 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 OR4K5Q8NGD3 323 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 XAGE5Q8WWM1 108 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 MARC2Q969Z3 335 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 CXorf58Q96LI9 332 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 ABHD1Q96SE0 405 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 REEP4Q9H6H4 257 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 MIEF1Q9NQG6 463 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 KCMF1Q9P0J7 381 aa12.65□□□□□ -0.38
ACTN1-204ENST00000438964 DSPPQ9NZW4 1301 aa12.65□□□□□ -0.39
ACTN1-204ENST00000438964 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 OAZ2O95190 189 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 TBXA2RP21731 343 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SELENOPP49908 381 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 PRSS42Q7Z5A4 293 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 POP5Q969H6 163 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms