RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OR7D2Q96RA2 312 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 NIPSNAP1Q9BPW8 284 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 YIPF4Q9BSR8 244 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 ACTRT3Q9BYD9 372 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 DUSP21Q9H596 190 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 NMNAT1Q9HAN9 279 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-216ENST00000437340 TMEM9Q9P0T7 183 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 B4DGG1 531 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 SEC14L2O76054 403 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 OXSR1O95747 527 aaPredicted RBP24.14■■□□□ 1.46
CPNE1-216ENST00000437340 PDGFBP01127 241 aaPredicted RBP24.14■■□□□ 1.46
CPNE1-216ENST00000437340 CSNK1A1LQ8N752 337 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 OR9Q2Q8NGE9 314 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 SGCDQ92629 289 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 GIMAP5Q96F15 307 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 TRNT1Q96Q11 434 aaKnown RBP24.14■■□□□ 1.46
CPNE1-216ENST00000437340 PAK1IP1Q9NWT1 392 aaPredicted RBP24.14■■□□□ 1.46
CPNE1-216ENST00000437340 TMCC3Q9ULS5 477 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 SLC9A8Q9Y2E8 581 aa24.14■■□□□ 1.46
CPNE1-216ENST00000437340 DUXAA6NLW8 204 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 WNT1P04628 370 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 EIF2S1P05198 315 aaKnown RBP24.14■■□□□ 1.45
CPNE1-216ENST00000437340 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.14■■□□□ 1.45
CPNE1-216ENST00000437340 ZNF770Q6IQ21 691 aaPredicted RBP24.14■■□□□ 1.45
CPNE1-216ENST00000437340 KLHL35Q6PF15 583 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 FAM92BQ6ZTR7 304 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 MS4A4EQ96PG1 132 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 CSF3RQ99062 836 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 UCK1Q9HA47 277 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 CCNB1IP1Q9NPC3 277 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 PTGFRNQ9P2B2 879 aa24.14■■□□□ 1.45
CPNE1-216ENST00000437340 CEP192Q8TEP8 1941 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 PTGES3LE9PB15 166 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 XPNPEP2O43895 674 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 AGR2O95994 175 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 ITIH1P19827 911 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 FMO3P31513 532 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 FASLGP48023 281 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 RACK1P63244 317 aaKnown RBP24.13■■□□□ 1.45
CPNE1-216ENST00000437340 SLC35A2P78381 396 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 TEKQ02763 1124 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 LTB4RQ15722 352 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 ATAD3BQ5T9A4 648 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 CWF19L1Q69YN2 538 aaKnown RBP24.13■■□□□ 1.45
CPNE1-216ENST00000437340 GTF2IRD2BQ6EKJ0 949 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 GTF2IRD2Q86UP8 949 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 ZNF761Q86XN6 746 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-216ENST00000437340 GKN2Q86XP6 184 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 ENTHD1Q8IYW4 607 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 KAT2AQ92830 837 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 PINK1Q9BXM7 581 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 GIN1Q9NXP7 522 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 RHCGQ9UBD6 479 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 CDC14AQ9UNH5 594 aa24.13■■□□□ 1.45
CPNE1-216ENST00000437340 MRPS2Q9Y399 296 aaKnown RBP24.13■■□□□ 1.45
CPNE1-216ENST00000437340 PCDHGA12O60330 932 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 GALR3O60755 368 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-216ENST00000437340 SEMA7AO75326 666 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 H1F0P07305 194 aaKnown RBP24.12■■□□□ 1.45
CPNE1-216ENST00000437340 CPMP14384 443 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 PCSK6P29122 969 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 SIM1P81133 766 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-216ENST00000437340 GPAT3Q53EU6 434 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 OR2L13Q8N349 312 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 OR4D11Q8NGI4 311 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 CCDC3Q9BQI4 270 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 DSPPQ9NZW4 1301 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 CCDC88CQ9P219 2028 aa24.12■■□□□ 1.45
CPNE1-216ENST00000437340 FAAHO00519 579 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 LGI1O95970 557 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 ADAP00813 363 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 PORP16435 677 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-216ENST00000437340 TYRP1P17643 537 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 DCST1Q5T197 706 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 DEF8Q6ZN54 512 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 DEPDC4Q8N2C3 294 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 AQP11Q8NBQ7 271 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 OR7G2Q8NG99 324 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 VANGL1Q8TAA9 524 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-216ENST00000437340 IPCEF1Q8WWN9 437 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-216ENST00000437340 C12orf43Q96C57 262 aaKnown RBP24.11■■□□□ 1.45
CPNE1-216ENST00000437340 OTUB1Q96FW1 271 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-216ENST00000437340 TLR4O00206 839 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 SYT5O00445 386 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 WBP4O75554 376 aaKnown RBP24.11■■□□□ 1.45
CPNE1-216ENST00000437340 SLITRK5O94991 958 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 IFI6P09912 130 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 PCMT1P22061 227 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 ELAVL4P26378 380 aaKnown RBP24.11■■□□□ 1.45
CPNE1-216ENST00000437340 PPP1CAP62136 330 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 GPR107Q5VW38 600 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 LAIR1Q6GTX8 287 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 HEPHL1Q6MZM0 1159 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 MFSD12Q6NUT3 480 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 CDC73Q6P1J9 531 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 ZNF438Q7Z4V0 828 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 CAMKK1Q8N5S9 505 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 ADAMTS15Q8TE58 950 aa24.11■■□□□ 1.45
CPNE1-216ENST00000437340 MUL1Q969V5 352 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms