RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HMGN2P05204 90 aaKnown RBP17.52■□□□□ 0.39
CLK1-205ENST00000434813 FHP07954 510 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 CSTF2P33240 577 aaKnown RBP eCLIP17.52■□□□□ 0.39
CLK1-205ENST00000434813 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.39
CLK1-205ENST00000434813 DLX2Q07687 328 aaPredicted RBP17.52■□□□□ 0.39
CLK1-205ENST00000434813 COX10Q12887 443 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 DOC2BQ14184 412 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 SSX1Q16384 188 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 RPE65Q16518 533 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 OCLNQ16625 522 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 TPRG1LQ5T0D9 272 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 MFSD4BQ5TF39 518 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 PODNL1Q6PEZ8 512 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 OPALINQ96PE5 141 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 MACROD1Q9BQ69 325 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 FNDC11Q9BVV2 318 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 RACGAP1Q9H0H5 632 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 FBXL12Q9NXK8 326 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 GPSM3Q9Y4H4 160 aa17.52■□□□□ 0.39
CLK1-205ENST00000434813 NINQ8N4C6 2090 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 DOCK8Q8NF50 2099 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 LGI1O95970 557 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 ZNF91Q05481 1191 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 PRKCDQ05655 676 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 DUSP2Q05923 314 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 LASP1Q14847 261 aaKnown RBP17.51■□□□□ 0.39
CLK1-205ENST00000434813 SLC48A1Q6P1K1 146 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 IL17RCQ8NAC3 791 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 MFSD9Q8NBP5 474 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 SRFBP1Q8NEF9 429 aaKnown RBP17.51■□□□□ 0.39
CLK1-205ENST00000434813 OR4K5Q8NGD3 323 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 OR6T1Q8NGN1 323 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 OTUB1Q96FW1 271 aaPredicted RBP17.51■□□□□ 0.39
CLK1-205ENST00000434813 SCARF2Q96GP6 870 aaPredicted RBP17.51■□□□□ 0.39
CLK1-205ENST00000434813 SLC6A18Q96N87 628 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 C1QTNF7Q9BXJ2 289 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 SPHK1Q9NYA1 384 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 MOSPD1Q9UJG1 213 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 CES1P1Q9UKY3 287 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 MKLN1Q9UL63 735 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 CFL2Q9Y281 166 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 RPL36Q9Y3U8 105 aaKnown RBP17.51■□□□□ 0.39
CLK1-205ENST00000434813 UNC80Q8N2C7 3258 aa17.51■□□□□ 0.39
CLK1-205ENST00000434813 A0A0G2JPF8 293 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 HNRNPCL2B2RXH8 293 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 HNRNPCL3B7ZW38 293 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 RNGTTO60942 597 aaKnown RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 SCG5P05408 212 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 HNRNPCL4P0DMR1 293 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 F3P13726 295 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 CERS1P27544 350 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 KIR2DL1P43626 348 aaPredicted RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 MAN2A2P49641 1150 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 PRKAG1P54619 331 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 RPS3AP61247 264 aaKnown RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 DNASE1L3Q13609 305 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 NCF4Q15080 339 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 CEBPEQ15744 281 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 ZNF181Q2M3W8 571 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 RNLSQ5VYX0 342 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 ZNF425Q6IV72 752 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 KIAA1211LQ6NV74 962 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 MTSS1LQ765P7 747 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 OLIG3Q7RTU3 272 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 OR14C36Q8NHC7 312 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 ITPKCQ96DU7 683 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 TMEM80Q96HE8 168 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 APOOQ9BUR5 198 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 PINK1Q9BXM7 581 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 ZNF576Q9H609 170 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 KIR3DX1Q9H7L2 352 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 TRIOBPQ9H2D6 2365 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 KIAA0513O60268 411 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 KDM1AO60341 852 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 ENDOUP21128 410 aaKnown RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 MMP11P24347 488 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 CMPK1P30085 196 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 S100A5P33763 92 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 PRR5P85299 388 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 ZNF45Q02386 682 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 LRRC32Q14392 662 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 AGAP7PQ5VUJ5 663 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 TMEM107Q6UX40 140 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 WDR53Q7Z5U6 358 aaPredicted RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 ZER1Q7Z7L7 766 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 MORN4Q8NDC4 146 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 GANCQ8TET4 914 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 TRNT1Q96Q11 434 aaKnown RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 RPP25Q9BUL9 199 aaKnown RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 POLDIP3Q9BY77 421 aaKnown RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 MKRN2Q9H000 416 aaKnown RBP17.5■□□□□ 0.39
CLK1-205ENST00000434813 SYNPO2LQ9H987 977 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 FBXW2Q9UKT8 454 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 UGT2A1Q9Y4X1 527 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 HEBP2Q9Y5Z4 205 aa17.5■□□□□ 0.39
CLK1-205ENST00000434813 ALPPL2P10696 532 aa17.49■□□□□ 0.39
CLK1-205ENST00000434813 CSNK2A2P19784 350 aaPredicted RBP17.49■□□□□ 0.39
CLK1-205ENST00000434813 PTGER1P34995 402 aa17.49■□□□□ 0.39
CLK1-205ENST00000434813 TIE1P35590 1138 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms