RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 APOBEC3BQ9UH17 382 aaKnown RBP11.24□□□□□ -0.61
CTCFL-209ENST00000433949 PHF11Q9UIL8 331 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 MGAT4BQ9UQ53 548 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 ENTPD2Q9Y5L3 495 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 SNX11Q9Y5W9 270 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 THADAQ6YHU6 1953 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 A0A0G2JPF8 293 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 OR5K4A6NMS3 321 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 HNRNPCL2B2RXH8 293 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 HNRNPCL3B7ZW38 293 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 TLR4O00206 839 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 BTN3A3O00478 584 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 FAAHO00519 579 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 PGRMC2O15173 223 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 BCAT2O15382 392 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-209ENST00000433949 EMC8O43402 210 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 INMTO95050 263 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 EML2O95834 649 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 HNRNPCL4P0DMR1 293 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 NR2F6P10588 404 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-209ENST00000433949 LIM2P55344 173 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 RACK1P63244 317 aaKnown RBP11.24□□□□□ -0.61
CTCFL-209ENST00000433949 EIF2B5Q13144 721 aaKnown RBP11.24□□□□□ -0.61
CTCFL-209ENST00000433949 DCST1Q5T197 706 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 LYSMD4Q5XG99 296 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 AP1ARQ63HQ0 302 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 TCTN3Q6NUS6 607 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 TRIM48Q8IWZ4 208 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 AQP11Q8NBQ7 271 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 OR9Q2Q8NGE9 314 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 NR4A3Q92570 626 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 PIGKQ92643 395 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 NMNAT1Q9HAN9 279 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-209ENST00000433949 PLGRKTQ9HBL7 147 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 C11orf16Q9NQ32 467 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 POT1Q9NUX5 634 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 MS4A12Q9NXJ0 267 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 CALML5Q9NZT1 146 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 LIPT1Q9Y234 373 aa11.24□□□□□ -0.61
CTCFL-209ENST00000433949 CCDC163A0A0D9SF12 145 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SH3D21A4FU49 640 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 GLOD5A6NK44 160 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SLC22A1O15245 554 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SDC3O75056 442 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 GABARAPO95166 117 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 HMGN2P05204 90 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 H1F0P07305 194 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SP9P0CG40 484 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 IDH2P48735 452 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 RAB8AP61006 207 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 HPCAP84074 193 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SYPL1Q16563 259 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SMN1Q16637 294 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 PLK5Q496M5 336 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 PRRT3Q5FWE3 981 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 WDR45BQ5MNZ6 344 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 LAIR1Q6GTX8 287 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 ZNF770Q6IQ21 691 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 LINC00299Q6ZSB3 139 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 AHSA2Q719I0 299 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 VN1R4Q7Z5H5 301 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SFTPA2Q8IWL1 248 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 CCDC116Q8IYX3 515 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 CAMKVQ8NCB2 501 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 UTP15Q8TED0 518 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 UCN3Q969E3 161 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 TM4SF19Q96DZ7 209 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SERINC2Q96SA4 455 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 MACROD1Q9BQ69 325 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 COPS4Q9BT78 406 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 NECTIN3Q9NQS3 549 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 KLK4Q9Y5K2 254 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 A0A1B0GVT2 93 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 A0A1W2PR77 199 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 FFAR1O14842 300 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 TNFP01375 233 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 MT-ND2P03891 347 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 CTSEP14091 401 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 NUDT1P36639 197 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 BTN3A2P78410 334 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 PTGES3Q15185 160 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 TBCEQ15813 527 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 C18orf63Q68DL7 685 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 SLC16A12Q6ZSM3 486 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 ZNF655Q8N720 491 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 OR5D16Q8NGK9 328 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 C1orf216Q8TAB5 229 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 FLVCR1-AS1Q8TAF5 88 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 OR2A14Q96R47 310 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 GSDMCQ9BYG8 508 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 PSORS1C1Q9UIG5 152 aa11.23□□□□□ -0.61
CTCFL-209ENST00000433949 TDRD6O60522 2096 aaKnown RBP11.23□□□□□ -0.61
CTCFL-209ENST00000433949 DSPPQ9NZW4 1301 aa11.22□□□□□ -0.61
CTCFL-209ENST00000433949 A0A1W2PRQ8 180 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms