RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 TWSG1Q9GZX9 223 aa16■□□□□ 0.15
CTSD-204ENST00000433655 QRSL1Q9H0R6 528 aaKnown RBP16■□□□□ 0.15
CTSD-204ENST00000433655 FBRSQ9HAH7 460 aa16■□□□□ 0.15
CTSD-204ENST00000433655 POLMQ9NP87 494 aaPredicted RBP16■□□□□ 0.15
CTSD-204ENST00000433655 CLN6Q9NWW5 311 aa16■□□□□ 0.15
CTSD-204ENST00000433655 SNX7Q9UNH6 387 aa16■□□□□ 0.15
CTSD-204ENST00000433655 ENTPD4Q9Y227 616 aa16■□□□□ 0.15
CTSD-204ENST00000433655 FANCMQ8IYD8 2048 aa16■□□□□ 0.15
CTSD-204ENST00000433655 PIPP12273 146 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 CSNK2A2P19784 350 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 MC3RP41968 323 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 MAGEA10P43363 369 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 RGS6P49758 472 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 RGS21Q2M5E4 152 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 SOWAHCQ53LP3 525 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 ARMCX4Q5H9R4 360 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 TJAP1Q5JTD0 557 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 SDE2Q6IQ49 451 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 ZNF367Q7RTV3 350 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 MORN4Q8NDC4 146 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 OR56A1Q8NGH5 318 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 SNRNP27Q8WVK2 155 aaKnown RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 KLHL6Q8WZ60 621 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 CRELD1Q96HD1 420 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 C10orf90Q96M02 699 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 DACH2Q96NX9 599 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 OR7D2Q96RA2 312 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 POLR2J3Q9H1A7 115 aaKnown RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 OR51E2Q9H255 320 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 RNF167Q9H6Y7 350 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 SCN3AQ9NY46 2000 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 A6NCN8 305 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 ZW10O43264 779 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 NME6O75414 186 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 CLK1P49759 484 aaKnown RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 XKP51811 444 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 BTN3A2P78410 334 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 TARDBPQ13148 414 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTSD-204ENST00000433655 COL9A2Q14055 689 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 LTB4RQ15722 352 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 PLAG1Q6DJT9 500 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 SNX29P2Q8IUI4 249 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 SRFBP1Q8NEF9 429 aaKnown RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 C9orf43Q8TAL5 461 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 TSACCQ96A04 125 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 MOAP1Q96BY2 351 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 ELP4Q96EB1 424 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 GIMAP5Q96F15 307 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 SIPA1Q96FS4 1042 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 GPA33Q99795 319 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 C6orf106Q9H6K1 298 aaPredicted RBP15.99■□□□□ 0.15
CTSD-204ENST00000433655 PCOLCE2Q9UKZ9 415 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 IFT52Q9Y366 437 aa15.99■□□□□ 0.15
CTSD-204ENST00000433655 A0A0G2JPF8 293 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 METTL15A6NJ78 407 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 HNRNPCL2B2RXH8 293 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 HNRNPCL3B7ZW38 293 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 DSCR3O14972 297 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 EMC8O43402 210 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 TPST2O60704 377 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 CBFA2T3O75081 653 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 OCM2P0CE71 109 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 OCMP0CE72 109 aaPredicted RBP15.98■□□□□ 0.15
CTSD-204ENST00000433655 HNRNPCL4P0DMR1 293 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 MMP11P24347 488 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 SMIM11AP58511 58 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 STXBP1P61764 594 aaKnown RBP15.98■□□□□ 0.15
CTSD-204ENST00000433655 TFF2Q03403 129 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 ADAM15Q13444 863 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 HTR4Q13639 388 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 INAQ16352 499 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 BHLHB9Q6PI77 547 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 C19orf48Q6RUI8 117 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 RD3Q7Z3Z2 195 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 ZER1Q7Z7L7 766 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 TRIM73Q86UV7 250 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 PRRC1Q96M27 445 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 MCOLN1Q9GZU1 580 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 SLC38A1Q9H2H9 487 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 DNAJC27Q9NZQ0 273 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 CHST2Q9Y4C5 530 aa15.98■□□□□ 0.15
CTSD-204ENST00000433655 GOLGA4Q13439 2230 aaKnown RBP15.98■□□□□ 0.15
CTSD-204ENST00000433655 MYO9BQ13459 2157 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 KDM1AO60341 852 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 ZIC2O95409 532 aaPredicted RBP15.97■□□□□ 0.15
CTSD-204ENST00000433655 RPLP0P05388 317 aaKnown RBP15.97■□□□□ 0.15
CTSD-204ENST00000433655 ZNF888P0CJ79 500 aaPredicted RBP15.97■□□□□ 0.15
CTSD-204ENST00000433655 ACSL1P33121 698 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 ALDH6A1Q02252 535 aaKnown RBP15.97■□□□□ 0.15
CTSD-204ENST00000433655 GPAT3Q53EU6 434 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 FBXO42Q6P3S6 717 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 CD300LDQ6UXZ3 194 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 USP30Q70CQ3 517 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 ZNF554Q86TJ5 538 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 IQCF1Q8N6M8 205 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 NUP43Q8NFH3 380 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 OR4K5Q8NGD3 323 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 NT5CQ8TCD5 201 aa15.97■□□□□ 0.15
CTSD-204ENST00000433655 GAL3ST3Q96A11 431 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms