RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 TRIM3O75382 744 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-204ENST00000430682 ENO1P06733 434 aaKnown RBP11.49□□□□□ -0.57
SMPD4-204ENST00000430682 MYL2P10916 166 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 PCSK2P16519 638 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 KRT15P19012 456 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-204ENST00000430682 EMDP50402 254 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 GXYLT1Q4G148 440 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 MTFR2Q6P444 385 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 FRMD7Q6ZUT3 714 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 SLC22A16Q86VW1 577 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 MED12LQ86YW9 2145 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 CCDC116Q8IYX3 515 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 LRRC25Q8N386 305 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-204ENST00000430682 VWA5B2Q8N398 1253 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 FAM109AQ8N4B1 249 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMPD4-204ENST00000430682 TP53INP1Q96A56 240 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 SMC6Q96SB8 1091 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 ITPAQ9BY32 194 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 BRINP2Q9C0B6 783 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 ZNF703Q9H7S9 590 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-204ENST00000430682 OXSMQ9NWU1 459 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 CCL27Q9Y4X3 112 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 FAM215AQ9Y5M1 114 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
SMPD4-204ENST00000430682 MPDZO75970 2070 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 SERTM1A2A2V5 107 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 KDM4EB2RXH2 506 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 ACOT7O00154 380 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 HNRNPRO43390 633 aaKnown RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 CLDN14O95500 239 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 CPA3P15088 417 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 CREB1P16220 341 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 KRT4P19013 534 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 AGAP20933 346 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 ABCD3P28288 659 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 TIA1P31483 386 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 DEKP35659 375 aaKnown RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 SMSP52788 366 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 NUP107P57740 925 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 DNAJB13P59910 316 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 KCNJ2P63252 427 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 PCLAFQ15004 111 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 ZNF628Q5EBL2 1059 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 CLEC6AQ6EIG7 209 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 GALNT18Q6P9A2 607 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 RGS9BPQ6ZS82 235 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 TICAM1Q8IUC6 712 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 CCDC71Q8IV32 467 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 C10orf107Q8IVU9 208 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 MCEMP1Q8IX19 187 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 SLC34A3Q8N130 599 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 GBP7Q8N8V2 638 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 OR7G1Q8NGA0 311 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 SPPL2AQ8TCT8 520 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 KAT2AQ92830 837 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 EXOSC8Q96B26 276 aaKnown RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 SDCCAG3Q96C92 435 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 GATA5Q9BWX5 397 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 SLC6A15Q9H2J7 730 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 ZFP64Q9NPA5 681 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 NMRK1Q9NWW6 199 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 SIRT5Q9NXA8 310 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 CNIH4Q9P003 139 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 BCAP29Q9UHQ4 241 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 UTS2RQ9UKP6 389 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 GRID1Q9ULK0 1009 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 RNF6Q9Y252 685 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 PLLPQ9Y342 182 aa11.48□□□□□ -0.57
SMPD4-204ENST00000430682 V9GYY5 206 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-204ENST00000430682 GNG14A0A1W2PPG7 69 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 TLDC2A0PJX2 215 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 C2orf72A6NCS6 295 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 AQP7O14520 342 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 COPEO14579 308 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 GUCY1B2O75343 617 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 ABCB1P08183 1280 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-204ENST00000430682 PTGDSP41222 190 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 CASP3P42574 277 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 TRPC1P48995 793 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 ACSM2AQ08AH3 577 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 SLC10A1Q14973 349 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 RPS6KA2Q15349 733 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 CEBPEQ15744 281 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 CCDC153Q494R4 210 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 ACSM2BQ68CK6 577 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 LURAP1LQ8IV03 231 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 SRRM1Q8IYB3 904 aaKnown RBP11.47□□□□□ -0.57
SMPD4-204ENST00000430682 TAGAPQ8N103 731 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 OR52R1Q8NGF1 315 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 OR9A2Q8NGT5 310 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 AENQ8WTP8 325 aaKnown RBP11.47□□□□□ -0.57
SMPD4-204ENST00000430682 DIO2Q92813 273 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 HGDQ93099 445 aa11.47□□□□□ -0.57
SMPD4-204ENST00000430682 EGLN2Q96KS0 407 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms