RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 WNT16Q9UBV4 365 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 HCN2Q9UL51 889 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 DIMT1Q9UNQ2 313 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 WASF3Q9UPY6 502 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 KLHL20Q9Y2M5 609 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 LSM2Q9Y333 95 aaKnown RBP8.23□□□□□ -1.09
GABPB1-205ENST00000429662 PLXNA2O75051 1894 aa8.23□□□□□ -1.09
GABPB1-205ENST00000429662 A0A1W2PRQ8 180 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FAM172BPA6NC97 362 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 KRT87PA6NCN2 255 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 OR10H3O60404 316 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GUCY1B2O75343 617 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ENTPD6O75354 484 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SH3BGRLO75368 114 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GPX5O75715 221 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 POP7O75817 140 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CCNKO75909 580 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PAPLNO95428 1278 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RAB36O95755 333 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CTSLP07711 333 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GAAP10253 952 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ERGP11308 486 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 POU2F1P14859 743 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SDHBP21912 280 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ELAVL4P26378 380 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PTBP1P26599 531 aaKnown RBP eCLIP8.22□□□□□ -1.092e-8■■■■□ 24.2
GABPB1-205ENST00000429662 POU1F1P28069 291 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GTF2E2P29084 291 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PBLDP30039 288 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 IFNA8P32881 189 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TNFSF8P32971 234 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CA8P35219 290 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CCR8P51685 355 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ARFIP1P53367 373 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PCBP4P57723 403 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 OR2B6P58173 313 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CYP4F2P78329 520 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 BNC1Q01954 994 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SCN1BQ07699 218 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TSTA3Q13630 321 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GANABQ14697 944 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF77Q15935 545 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SSX1Q16384 188 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 DUSP7Q16829 419 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM52BQ4KMG9 183 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 C3orf38Q5JPI3 329 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 LY6G5CQ5SRR4 150 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ADNP2Q6IQ32 1131 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ZC3H14Q6PJT7 736 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 XKRXQ6PP77 449 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PARS2Q7L3T8 475 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 C6orf120Q7Z4R8 191 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PDZD3Q86UT5 571 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 NUDT13Q86X67 352 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RAB43Q86YS6 212 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TRAPPC5Q8IUR0 188 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 UBQLNLQ8IYU4 475 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SLC34A3Q8N130 599 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GDPD1Q8N9F7 314 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TTLQ8NG68 377 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SLC38A5Q8WUX1 472 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RGMAQ96B86 450 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 MOAP1Q96BY2 351 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TM4SF18Q96CE8 201 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM19Q96HH6 336 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 COQ7Q99807 217 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FUZQ9BT04 418 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CNPPD1Q9BV87 410 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FAIM2Q9BWQ8 316 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TSSK6Q9BXA6 273 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TEX12Q9BXU0 123 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 MS4A8Q9BY19 250 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ZDHHC5Q9C0B5 715 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 HHATLQ9HCP6 504 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 BCL2L10Q9HD36 194 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF221Q9UK13 617 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 ACSL6Q9UKU0 697 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SLC9A8Q9Y2E8 581 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CMAHPQ9Y471 501 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SNX8Q9Y5X2 465 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 IRAK3Q9Y616 596 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PIKFYVEQ9Y2I7 2098 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 OBSL1O75147 1896 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TRBV4-1A0A0J9YWV2 114 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CENPBD1B2RD01 187 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 H3BN98 237 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 FFAR1O14842 300 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 TM4SF5O14894 197 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CASC3O15234 703 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 SEC14L5O43304 696 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 LZTS3O60299 673 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 CSO75390 466 aaKnown RBP8.22□□□□□ -1.09
GABPB1-205ENST00000429662 RECKO95980 971 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 BCHEP06276 602 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 PROS1P07225 676 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GSTT2P0CG29 244 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 GSTT2BP0CG30 244 aa8.22□□□□□ -1.09
GABPB1-205ENST00000429662 NR2F6P10588 404 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms