RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 EQTNQ9NQ60 294 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 KLHL1Q9NR64 748 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 PCDHGB4Q9UN71 923 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 MAPRE3Q9UPY8 281 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 B3GNT3Q9Y2A9 372 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 GPR45Q9Y5Y3 372 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 CHD6Q8TD26 2715 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 CROCCQ5TZA2 2017 aa13.5□□□□□ -0.25
SGCE-204ENST00000428696 TNRC6AQ8NDV7 1962 aaKnown RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 OR5H15A6NDH6 313 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 PRAMEF2O60811 474 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 BCAS2O75934 225 aaPredicted RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 CPSF4O95639 269 aaKnown RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 C6orf47O95873 294 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 S1PR1P21453 382 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 SOAT1P35610 550 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 CYB561P49447 251 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 CDK9P50750 372 aaKnown RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 CLNS1AP54105 237 aaKnown RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 SRSF11Q05519 484 aaKnown RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 ZNF155Q12901 538 aaPredicted RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 TLR1Q15399 786 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 OR1C1Q15619 314 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 MAPKAPK3Q16644 382 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 GSTA3Q16772 222 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 FAM174BQ3ZCQ3 159 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 ZNF468Q5VIY5 522 aaPredicted RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 TMEM64Q6YI46 380 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 RIMKLAQ8IXN7 391 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 PRR22Q8IZ63 422 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 VPS37AQ8NEZ2 397 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 OR8K3Q8NH51 312 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 HAS2Q92819 552 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 COQ8BQ96D53 544 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 ELP4Q96EB1 424 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 CHMP6Q96FZ7 201 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 TEX37Q96LM6 180 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 CCDC28BQ9BUN5 200 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 BHLHE41Q9C0J9 482 aaPredicted RBP13.49□□□□□ -0.25
SGCE-204ENST00000428696 C3orf14Q9HBI5 128 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 TAS2R9Q9NYW1 312 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 LRFN1Q9P244 771 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 PRODH2Q9UF12 536 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 CFL2Q9Y281 166 aa13.49□□□□□ -0.25
SGCE-204ENST00000428696 TMEM200CA6NKL6 621 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 TTLL8A6PVC2 850 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 A8MVJ9 347 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 TBX19O60806 448 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 OR6B1O95007 311 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 CBX7O95931 251 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 CLPSP04118 112 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 KIR3DL1P43629 444 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 ARFIP2P53365 341 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 EBPQ15125 230 aaKnown RBP13.48□□□□□ -0.25
SGCE-204ENST00000428696 PIGGQ5H8A4 983 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 SPANXN4Q5MJ08 99 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 SLC6A19Q695T7 634 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 PAOXQ6QHF9 649 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 IGFL3Q6UXB1 125 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 PRICKLE2Q7Z3G6 844 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 WDR53Q7Z5U6 358 aaPredicted RBP13.48□□□□□ -0.25
SGCE-204ENST00000428696 HPS6Q86YV9 775 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 HORMAD2Q8N7B1 307 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 OR4A15Q8NGL6 344 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 SLC22A8Q8TCC7 542 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 OR5P2Q8WZ92 322 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 TMEM125Q96AQ2 219 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 C5orf34Q96MH7 638 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 SIGLEC12Q96PQ1 595 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 RASL10BQ96S79 203 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 TMEM120AQ9BXJ8 343 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 ITPAQ9BY32 194 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 ACSS1Q9NUB1 689 aaPredicted RBP13.48□□□□□ -0.25
SGCE-204ENST00000428696 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 ZNF639Q9UID6 485 aa13.48□□□□□ -0.25
SGCE-204ENST00000428696 UPK1AO00322 258 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 PLOD3O60568 738 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 COQ9O75208 318 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CD46P15529 392 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 SOX3P41225 446 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 TNFSF10P50591 281 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 HLCSP50747 726 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 NRG3P56975 720 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 DUSP8Q13202 625 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 CEBPEQ15744 281 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 PDCD4Q53EL6 469 aaKnown RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 ANXA8L1Q5VT79 327 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 OPN5Q6U736 354 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 IGFL2Q6UWQ7 119 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CLECL1Q8IZS7 167 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 LGI4Q8N135 537 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CYP4Z2PQ8N1L4 340 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 NATD1Q8N6N6 113 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 FAM13CQ8NE31 585 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms