RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 OR5P2Q8WZ92 322 aa12.6□□□□□ -0.39
MCF2L-213ENST00000421756 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
MCF2L-213ENST00000421756 GABARAPL1Q9H0R8 117 aa12.6□□□□□ -0.39
MCF2L-213ENST00000421756 AKIP1Q9NQ31 210 aa12.6□□□□□ -0.39
MCF2L-213ENST00000421756 SIRT3Q9NTG7 399 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-213ENST00000421756 TMEM74BQ9NUR3 256 aa12.6□□□□□ -0.39
MCF2L-213ENST00000421756 MARK1Q9P0L2 795 aa12.6□□□□□ -0.39
MCF2L-213ENST00000421756 MDC1Q14676 2089 aaKnown RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 A0A1W2PPV9 198 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 EFCAB10A6NFE3 127 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 DSCR3O14972 297 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 KMOO15229 486 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 SERPINB7O75635 380 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 GSTM5P46439 218 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 ZNF311Q5JNZ3 666 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 HSDL2Q6YN16 418 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 TMIEQ8NEW7 156 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 OR4C15Q8NGM1 316 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 CHPT1Q8WUD6 406 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 IPCEF1Q8WWN9 437 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 TRMT61AQ96FX7 289 aaKnown RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 AMDHD1Q96NU7 426 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 TBC1D29Q9UFV1 150 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 GPX5O75715 221 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 AIFM1O95831 613 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 MMP11P24347 488 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 CXCR2P25025 360 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 CD79BP40259 229 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 MAGEA10P43363 369 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 KCNC4Q03721 635 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 SPANXN2Q5MJ10 180 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 LCTLQ6UWM7 567 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 MFSD4AQ8N468 514 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 CELF2-AS1Q8N7Q2 184 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 TP53I13Q8NBR0 393 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 ASPNQ9BXN1 380 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 NECTIN3Q9NQS3 549 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 CSNK1G3Q9Y6M4 447 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 OBSL1O75147 1896 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 LRIT2A6NDA9 550 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 PLD2O14939 933 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 SLC2A10O95528 541 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 APODP05090 189 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 PORP16435 677 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 PRDX1Q06830 199 aaKnown RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 FIGNL1Q6PIW4 674 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 PRSS41Q7RTY9 318 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 GPR155Q7Z3F1 870 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 RAB42Q8N4Z0 105 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 PARP16Q8N5Y8 322 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 METTL27Q8N6F8 245 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-213ENST00000421756 SLC16A11Q8NCK7 471 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 MYADMQ96S97 322 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 SLC17A9Q9BYT1 436 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 RACGAP1Q9H0H5 632 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 TMEM168Q9H0V1 697 aa12.59□□□□□ -0.39
MCF2L-213ENST00000421756 CDRT1O95170 752 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 FGF19O95750 216 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RPN2P04844 631 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 NR4A2P43354 598 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RAB28P51157 221 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 EEF1A2Q05639 463 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 KLHL12Q53G59 568 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 GALNT12Q8IXK2 581 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 FAM46DQ8NEK8 389 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 PRRG3Q9BZD7 231 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 MED20Q9H944 212 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 P2RX2Q9UBL9 471 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 GPR34Q9UPC5 381 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RTTNQ86VV8 2226 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 A6NL46 340 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 H3BSH0 61 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RNGTTO60942 597 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 NCR1O76036 304 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RPL3P39023 403 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RPS7P62081 194 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RBBP4Q09028 425 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 PDE7AQ13946 482 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RNF165Q6ZSG1 346 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 SLC46A3Q7Z3Q1 461 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 KIAA0907Q7Z7F0 614 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 PARGQ86W56 976 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 OR5T3Q8NGG3 340 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 BBS10Q8TAM1 723 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 TMED9Q9BVK6 235 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 HDHD5Q9BXW7 423 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 COL6A3P12111 3177 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF888P0CJ79 500 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RPS19P39019 145 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF91Q05481 1191 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 RNASE12Q5GAN4 147 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 OR4F15Q8NGB8 312 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms