RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TMEM64Q6YI46 380 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 TIFABQ6ZNK6 161 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 SH2D5Q6ZV89 423 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 COMMD6Q7Z4G1 85 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 DMRTC2Q8IXT2 367 aaPredicted RBP8.66□□□□□ -1.02
NUP50-205ENST00000419387 C17orf47Q8NEP4 570 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 OR7G1Q8NGA0 311 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 NEIL3Q8TAT5 605 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 SPPL2AQ8TCT8 520 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 TM4SF18Q96CE8 201 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 MTBPQ96DY7 904 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 SECISBP2Q96T21 854 aaKnown RBP8.66□□□□□ -1.02
NUP50-205ENST00000419387 DOHHQ9BU89 302 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 NPDC1Q9NQX5 325 aaPredicted RBP8.66□□□□□ -1.02
NUP50-205ENST00000419387 SPRR3Q9UBC9 169 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 B4GALT7Q9UBV7 327 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 TRPS1Q9UHF7 1281 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 ZNF225Q9UK10 706 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 PSME2Q9UL46 239 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 PCDHGB3Q9Y5G1 929 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 PHF3Q92576 2039 aaKnown RBP8.66□□□□□ -1.02
NUP50-205ENST00000419387 FBN2P35556 2912 aa8.66□□□□□ -1.02
NUP50-205ENST00000419387 A0A0G2JNJ9 132 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 EXOC1LA0A1B0GW35 172 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 FAM47E-STBD1D6RA91 191 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 ERAL1O75616 437 aaKnown RBP8.65□□□□□ -1.02
NUP50-205ENST00000419387 SNX4O95219 450 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 CSNK2A2P19784 350 aaPredicted RBP8.65□□□□□ -1.02
NUP50-205ENST00000419387 GDF1P27539 372 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 FEN1P39748 380 aaKnown RBP8.65□□□□□ -1.02
NUP50-205ENST00000419387 ADH7P40394 386 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 CASP3P42574 277 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 TRPC1P48995 793 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 TMED10P49755 219 aaKnown RBP8.65□□□□□ -1.02
NUP50-205ENST00000419387 TRA2BP62995 288 aaKnown RBP8.65□□□□□ -1.02
NUP50-205ENST00000419387 RPP38P78345 283 aaKnown RBP8.65□□□□□ -1.02
NUP50-205ENST00000419387 MGAT2Q10469 447 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 MAP4K2Q12851 820 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 RPS6KA2Q15349 733 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 PRICKLE4Q2TBC4 344 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 UNC50Q53HI1 259 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 ZNF678Q5SXM1 525 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 BICRALQ6AI39 1079 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 FAM111BQ6SJ93 734 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 LIX1LQ8IVB5 337 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 CLYBLQ8N0X4 340 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 MMP21Q8N119 569 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 VWA5B2Q8N398 1253 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 LIX1Q8N485 282 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 CAVIN3Q969G5 261 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 ZNF597Q96LX8 424 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 FAIM2Q9BWQ8 316 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 ANGPTL4Q9BY76 406 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 SLC6A15Q9H2J7 730 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 TMEM216Q9P0N5 145 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 VPS29Q9UBQ0 182 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 Q9UFV3 132 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 FETUBQ9UGM5 382 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 ZNF639Q9UID6 485 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 ITGB1BP2Q9UKP3 347 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 CFL2Q9Y281 166 aa8.65□□□□□ -1.02
NUP50-205ENST00000419387 PDZD2O15018 2839 aa8.65□□□□□ -1.03
NUP50-205ENST00000419387 NINQ8N4C6 2090 aa8.65□□□□□ -1.03
NUP50-205ENST00000419387 AHRRA9YTQ3 701 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 MANBAO00462 879 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 CTIFO43310 598 aaKnown RBP8.64□□□□□ -1.03
NUP50-205ENST00000419387 DLX3O60479 287 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 CDH16O75309 829 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 TRAPPC6AO75865 159 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 SUPT7LO94864 414 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 KRT6AP02538 564 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 KRT6BP04259 564 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 ATP1B1P05026 303 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 HPNP05981 417 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 ABCB1P08183 1280 aaPredicted RBP8.64□□□□□ -1.03
NUP50-205ENST00000419387 HSD3B1P14060 373 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 NAGAP17050 411 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 KRT15P19012 456 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 IMPDH1P20839 514 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 GPX3P22352 226 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 ATP5F1P24539 256 aaPredicted RBP8.64□□□□□ -1.03
NUP50-205ENST00000419387 HSD3B2P26439 372 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 ABCD3P28288 659 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 KRT6CP48668 564 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 MASP1P48740 699 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 CSTF3Q12996 717 aaKnown RBP8.64□□□□□ -1.03
NUP50-205ENST00000419387 DUSP8Q13202 625 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 RASA2Q15283 850 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 SLC25A35Q3KQZ1 300 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 TCHHL1Q5QJ38 904 aaPredicted RBP8.64□□□□□ -1.03
NUP50-205ENST00000419387 SWT1Q5T5J6 900 aaKnown RBP8.64□□□□□ -1.03
NUP50-205ENST00000419387 RIPPLY2Q5TAB7 128 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 FNDC7Q5VTL7 733 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 CES4AQ5XG92 561 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 LCA5Q86VQ0 697 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 ULK2Q8IYT8 1036 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 PRR22Q8IZ63 422 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 MREGQ8N565 214 aa8.64□□□□□ -1.03
NUP50-205ENST00000419387 C1orf52Q8N6N3 182 aaKnown RBP8.64□□□□□ -1.03
NUP50-205ENST00000419387 CDYL2Q8N8U2 506 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms