RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ARL15Q9NXU5 204 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SPATA2Q9UM82 520 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PCDHGC4Q9Y5F7 938 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF106Q9H2Y7 1883 aaKnown RBP7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TCRBV16S1A1N1A0A5B0 115 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 IRGMA1A4Y4 181 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 MEIS3P2A8K0S8 358 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 FAM25EA8MYX2 175 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 F8W036 122 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PLATP00750 562 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 ACP2P11117 423 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SELENOPP49908 381 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 LYPD4Q6UWN0 246 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SERPINA9Q86WD7 417 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 GPR135Q8IZ08 494 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TRPV1Q8NER1 839 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 OR52N2Q8NGI0 321 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 MOSPD2Q8NHP6 518 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 FGF11Q92914 225 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 HIST1H2AHQ96KK5 128 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 DDOQ99489 341 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 PKP4Q99569 1192 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TMED9Q9BVK6 235 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 CACNG6Q9BXT2 260 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 SAP130Q9H0E3 1048 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 C11orf49Q9H6J7 331 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 C1GALT1Q9NS00 363 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 IL17CQ9P0M4 197 aa7.6□□□□□ -1.19
HMGXB4-202ENST00000418170 TP53BP1Q12888 1972 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 EYSQ5T1H1 3165 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 A0A0D9SEW6 157 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 RRN3P2A6NIE6 340 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PRAMEF4O60810 478 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 H2AFB2P0C5Z0 115 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 LIMS3P0CW19 117 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 LIMS4P0CW20 117 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 ELAVL4P26378 380 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SOX18P35713 384 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 RPL35P42766 123 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 RECQLP46063 649 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 RPIAP49247 311 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 AFF1P51825 1210 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 BLVRAP53004 296 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 TAP2Q03519 686 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 DSC1Q08554 894 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 MBTPS1Q14703 1052 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 TCTE1Q5JU00 501 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PRAMEF9Q5VWM5 478 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 IQCF1Q8N6M8 205 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 C11orf24Q96F05 449 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 TTYH1Q9H313 450 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 EMC3Q9P0I2 261 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 VPS29Q9UBQ0 182 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PRSS21Q9Y6M0 314 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PLXNA3P51805 1871 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SPTBN5Q9NRC6 3674 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PLSCR5A0PG75 271 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 MPTX1A8MV57 137 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 RNASET2O00584 256 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 OR10H3O60404 316 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 APOL3O95236 402 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 EIF4EP06730 217 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 IDSP22304 550 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 AKR1D1P51857 326 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 EFNB1P98172 346 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PUM1Q14671 1186 aaKnown RBP eCLIP7.59□□□□□ -1.199e-6■■□□□ 13.5
HMGXB4-202ENST00000418170 ZNF630Q2M218 657 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PABPC1L2AQ5JQF8 200 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 BTN2A1Q7KYR7 527 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 NR2C2APQ86WQ0 139 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 BCL7CQ8WUZ0 217 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 APOBEC4Q8WW27 367 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 MYEOVQ96EZ4 313 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 ABHD1Q96SE0 405 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 TBC1D17Q9HA65 648 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 FBXL2Q9UKC9 423 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 TMEM5Q9Y2B1 443 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 EXOSC1Q9Y3B2 195 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SMIM35A0A1B0GVV1 85 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 OR6C65A6NJZ3 312 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 FAAHO00519 579 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SIGLEC6O43699 453 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC28A2O43868 658 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 DDNO94850 711 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 OR12D1P0DN82 309 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 CXCL2P19875 107 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 POU3F2P20265 443 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 CALCRP30988 508 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 ACSL1P33121 698 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 CD79BP40259 229 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 ASMTP46597 345 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 RAB8AP61006 207 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 BCL2L1Q07817 233 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 LRRC74AQ0VAA2 488 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 GPR17Q13304 367 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 INSL4Q14641 139 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 GRIN2CQ14957 1233 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SF1Q15637 639 aaKnown RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 DCST1Q5T197 706 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms