RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ERVK-11Q9UQG0 969 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 PCDHGA10Q9Y5H3 936 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 A0A087WV62 115 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 PLOD2O00469 737 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 DYNC1I1O14576 645 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 DIAPH2O60879 1101 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 DCAF7P61962 342 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 EXOSC7Q15024 291 aaKnown RBP21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 ZNF766Q5HY98 468 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 ZNF468Q5VIY5 522 aaPredicted RBP21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 C16orf47Q6ZP98 133 aaPredicted RBP21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 FAM47EQ6ZV65 393 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 RIMKLAQ8IXN7 391 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 TMEM178AQ8NBL3 297 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 MDS2Q8NDY4 140 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 C17orf47Q8NEP4 570 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 OR7A2PQ8NGA2 310 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 C16orf52Q8NHV5 167 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 COQ8BQ96D53 544 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 SIGLEC12Q96PQ1 595 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 TAS2R9Q9NYW1 312 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 TLN1Q9Y490 2541 aaKnown RBP21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 COL6A6A6NMZ7 2263 aa21.38■■□□□ 1.01
SMARCB1-205ENST00000417137 ZNF195O14628 629 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 COQ9O75208 318 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 CBX7O95931 251 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 IFI6P09912 130 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 GPC1P35052 558 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 FRKP42685 505 aaPredicted RBP21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 ST13P50502 369 aaKnown RBP21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 NRG3P56975 720 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 RPS6KA2Q15349 733 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 INAQ16352 499 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 SLC9B1Q4ZJI4 515 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 ZNF385BQ569K4 471 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 SLC25A25Q6KCM7 469 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 EPGNQ6UW88 154 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 ACAD11Q709F0 780 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 DND1Q8IYX4 353 aaKnown RBP21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 CYP4Z2PQ8N1L4 340 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 KRTCAP2Q8N6L1 136 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 CIDECQ96AQ7 238 aaPredicted RBP21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 EPN3Q9H201 632 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 ZNF462Q96JM2 2506 aa21.37■■□□□ 1.01
SMARCB1-205ENST00000417137 SPTA1P02549 2419 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 CAPN14A8MX76 684 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 SLC25A12O75746 678 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 NEURL1O76050 574 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 SP1P08047 785 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 LAMP1P11279 417 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 SOX18P35713 384 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 SOX3P41225 446 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 NR0B1P51843 470 aaKnown RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 CLNS1AP54105 237 aaKnown RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 HSPB3Q12988 150 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 MLC1Q15049 377 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 INPP5JQ15735 1006 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 LSM12Q3MHD2 195 aaKnown RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 IL20RBQ6UXL0 311 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 ZNF441Q8N8Z8 693 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 OR7G2Q8NG99 324 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 ADIPOR1Q96A54 375 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 ELP4Q96EB1 424 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 SGCZQ96LD1 299 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 BHLHE41Q9C0J9 482 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 TIMMDC1Q9NPL8 285 aa21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 DDX18Q9NVP1 670 aaKnown RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 C19orf53Q9UNZ5 99 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 COPG1Q9Y678 874 aaKnown RBP21.36■■□□□ 1.01
SMARCB1-205ENST00000417137 A0A1W2PRB8 838 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 OR6B1O95007 311 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 IDO1P14902 403 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 GPX3P22352 226 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 MC3RP41968 323 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 EMDP50402 254 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 SRSF11Q05519 484 aaKnown RBP21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 MAPKAPK3Q16644 382 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 PGS1Q32NB8 556 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 TMEM107Q6UX40 140 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 ZNF551Q7Z340 670 aaPredicted RBP21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 MAVSQ7Z434 540 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 CAMKMTQ7Z624 323 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 CISD2Q8N5K1 135 aaKnown RBP21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 FAM98AQ8NCA5 519 aaKnown RBP21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 CPT1CQ8TCG5 803 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 SCMH1Q96GD3 660 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 DUSP26Q9BV47 211 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 C3orf14Q9HBI5 128 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 AIG1Q9NVV5 245 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 MAP10Q9P2G4 905 aa21.35■■□□□ 1.01
SMARCB1-205ENST00000417137 TCP11X1B4DZS4 312 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 J3QKU1 62 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 UBDO15205 165 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 ACOX3O15254 700 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 RASAL1O95294 804 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 DRD5P21918 477 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 PPICP45877 212 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 MLLT10P55197 1068 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 PSPHP78330 225 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 TLE1Q04724 770 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms