RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 DNAJB5O75953 348 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 UBXN7O94888 489 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PTTG1O95997 202 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TYRP1P17643 537 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 HOXC5Q00444 222 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 SEC23BQ15437 767 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 AGAP6Q5VW22 663 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PNCKQ6P2M8 343 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 OR6N2Q8NGY6 317 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 AGAP4Q96P64 663 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 OR5M11Q96RB7 305 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TLR9Q9NR96 1032 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 PCDHGB1Q9Y5G3 927 aa12.3□□□□□ -0.44
SCN1B-202ENST00000415950 TJP1Q07157 1748 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 M0R3H8 397 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SSX5O60225 188 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 CDC123O75794 336 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 STC2O76061 302 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 RETP07949 1114 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 HTR1AP08908 422 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 ATXN1LP0C7T5 689 aaKnown RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 PDGFRLQ15198 375 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 NTRK2Q16620 822 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SPATS1Q496A3 300 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 STOML3Q8TAV4 291 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 PEX13Q92968 403 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 PIP5K1AQ99755 562 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 IKZF5Q9H5V7 419 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 MGAT4CQ9UBM8 478 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 CACNA1IQ9P0X4 2223 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 PRMT3O60678 531 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 GTF2F2P13984 249 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 EPCAMP16422 314 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 GCGRP47871 477 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 RGS19P49795 217 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 AQP6Q13520 282 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 CATSPEREQ5SY80 951 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 NADSYN1Q6IA69 706 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 RFLNAQ6ZTI6 216 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 DENND6BQ8NEG7 585 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 OR8J1Q8NGP2 316 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 JPH3Q8WXH2 748 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 PGAP3Q96FM1 320 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 HIST1H2AAQ96QV6 131 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SYT17Q9BSW7 474 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 C11orf98E9PRG8 122 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 CSTBP04080 98 aaKnown RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 ADRA1AP35348 466 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 TMEM115Q12893 351 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 MUL1Q969V5 352 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 S100PBPQ96BU1 408 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 NELL2Q99435 816 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SLC28A3Q9HAS3 691 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF670-ZNF695F2Z2N8 137 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SOX1O00570 391 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SEC14L2O76054 403 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SFTPBP07988 381 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 HCKP08631 526 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 OR2G6Q5TZ20 316 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 BRAT1Q6PJG6 821 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 TTLL10Q6ZVT0 673 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 MAFIPQ8WZ33 124 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 GGHQ92820 318 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 MROQ9BYG7 248 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 NMNAT1Q9HAN9 279 aaPredicted RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 SRA1Q9HD15 236 aaKnown RBP12.29□□□□□ -0.44
SCN1B-202ENST00000415950 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
SCN1B-202ENST00000415950 FEZF1A0PJY2 475 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 SMLR1H3BR10 107 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 NPR2P20594 1047 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 ACRV1P26436 265 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 HSD11B1P28845 292 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 IRF5Q13568 498 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 WASH2PQ6VEQ5 465 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 TMCO2Q7Z6W1 182 aaPredicted RBP12.28□□□□□ -0.44
SCN1B-202ENST00000415950 UBE2Q1Q7Z7E8 422 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 TTLQ8NG68 377 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 OSTF1Q92882 214 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 NLGN3Q9NZ94 848 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF726A6NNF4 738 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 B4DGG1 531 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 PAK4O96013 591 aaPredicted RBP12.28□□□□□ -0.44
SCN1B-202ENST00000415950 SSTR2P30874 369 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 GPR4P46093 362 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 NOGQ13253 232 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 LY6G5CQ5SRR4 150 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF367Q7RTV3 350 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 TMPRSS12Q86WS5 348 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 OR9A1PQ8NGU1 263 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 SAV1Q9H4B6 383 aaPredicted RBP12.28□□□□□ -0.44
SCN1B-202ENST00000415950 FNIP2Q9P278 1114 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 IL36AQ9UHA7 158 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 XIRP1Q702N8 1843 aaKnown RBP12.28□□□□□ -0.44
SCN1B-202ENST00000415950 ANHXE9PGG2 379 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 LATO43561 262 aa12.28□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF821O75541 412 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms