RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 COL9A2Q14055 689 aaPredicted RBP13.64□□□□□ -0.23
SGCE-202ENST00000415788 BROXQ5VW32 411 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 RETREG3Q86VR2 466 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 PTRH1Q86Y79 214 aaKnown RBP13.64□□□□□ -0.23
SGCE-202ENST00000415788 MIER2Q8N344 545 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
SGCE-202ENST00000415788 TANKQ92844 425 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 KIAA1143Q96AT1 154 aaPredicted RBP13.64□□□□□ -0.23
SGCE-202ENST00000415788 FBXL20Q96IG2 436 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 PRDM9Q9NQV7 894 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 ASIC5Q9NY37 505 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 KCMF1Q9P0J7 381 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 MAP10Q9P2G4 905 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 KCND3Q9UK17 655 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 PSME2Q9UL46 239 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 EIF3LQ9Y262 564 aaKnown RBP13.64□□□□□ -0.23
SGCE-202ENST00000415788 POLR3HQ9Y535 204 aaPredicted RBP13.64□□□□□ -0.23
SGCE-202ENST00000415788 ASB4Q9Y574 426 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 SPTBP11277 2137 aa13.64□□□□□ -0.23
SGCE-202ENST00000415788 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 VSTM2BA6NLU5 285 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 EI24O14681 340 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 ARPC2O15144 300 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 GBAP04062 536 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 CYC1P08574 325 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 PRPS2P11908 318 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 CD247P20963 164 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 RPS3AP61247 264 aaKnown RBP13.63□□□□□ -0.23
SGCE-202ENST00000415788 RPS15P62841 145 aaKnown RBP13.63□□□□□ -0.23
SGCE-202ENST00000415788 SYT16Q17RD7 645 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 MLIPQ5VWP3 458 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 LCN10Q6JVE6 187 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 FAM199XQ6PEV8 388 aaPredicted RBP13.63□□□□□ -0.23
SGCE-202ENST00000415788 IKBIPQ70UQ0 350 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 SPATA19Q7Z5L4 167 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 ZNF248Q8NDW4 579 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 OR9I1Q8NGQ6 314 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 CT55Q8WUE5 264 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 PEX11GQ96HA9 241 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 MAPKAP1Q9BPZ7 522 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 FAIM2Q9BWQ8 316 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 EBPLQ9BY08 206 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 AKIRIN1Q9H9L7 192 aaPredicted RBP13.63□□□□□ -0.23
SGCE-202ENST00000415788 CTSFQ9UBX1 484 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 ANAPC2Q9UJX6 822 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 NR5A2O00482 541 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 PROM1O43490 865 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 DNAJB5O75953 348 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 LDLRP01130 860 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 FHP07954 510 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 ZGLP1P0C6A0 271 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 CPN2P22792 545 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 TNFRSF17Q02223 184 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 DNASE1L3Q13609 305 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 HEPACAMQ14CZ8 416 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 NKG7Q16617 165 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 RBM48Q5RL73 367 aaKnown RBP13.63□□□□□ -0.23
SGCE-202ENST00000415788 ZC3H7AQ8IWR0 971 aaKnown RBP13.63□□□□□ -0.23
SGCE-202ENST00000415788 SLC15A4Q8N697 577 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 C7orf57Q8NEG2 295 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 STT3BQ8TCJ2 826 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 LRRC58Q96CX6 371 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 ZNF347Q96SE7 839 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 SLC39A3Q9BRY0 314 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 MYNNQ9NPC7 610 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 CMTM6Q9NX76 183 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 GIMAP2Q9UG22 337 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 FBXW2Q9UKT8 454 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 ZNF232Q9UNY5 417 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 ATG4BQ9Y4P1 393 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 PCDHGA6Q9Y5G7 932 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 PCDHA9Q9Y5H5 950 aa13.63□□□□□ -0.23
SGCE-202ENST00000415788 SPTBN2O15020 2390 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 TCRBV5S2A0A599 114 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 HTR3EA5X5Y0 456 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 CYR61O00622 381 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 CLDN4O14493 209 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 TERTO14746 1132 aaKnown RBP13.62□□□□□ -0.23
SGCE-202ENST00000415788 ABCB7O75027 752 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 DNAJB6O75190 326 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 ALDOCP09972 364 aaKnown RBP13.62□□□□□ -0.23
SGCE-202ENST00000415788 NR2F6P10588 404 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 ZNF182P17025 639 aaPredicted RBP13.62□□□□□ -0.23
SGCE-202ENST00000415788 SDC1P18827 310 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 SLC6A2P23975 617 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 DLSTP36957 453 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 ASMTP46597 345 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 MRPL19P49406 292 aaKnown RBP13.62□□□□□ -0.23
SGCE-202ENST00000415788 TMED10P49755 219 aaKnown RBP13.62□□□□□ -0.23
SGCE-202ENST00000415788 ATP1A4Q13733 1029 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 ZNF846Q147U1 533 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 NEDD8Q15843 81 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 CYP51A1Q16850 503 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 ZNF595Q8IYB9 648 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 TMEM132CQ8N3T6 1108 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 KCNE4Q8WWG9 221 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 TM4SF18Q96CE8 201 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 BDH2Q9BUT1 245 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms