RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TEX13CA0A0J9YWL9 993 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 C7orf66A4D0T2 115 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 LCHNA4D1U4 455 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 IQCF5A8MTL0 148 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 NIPSNAP2O75323 286 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MTX2O75431 263 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 CLDN7O95471 211 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ADH1CP00326 375 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SERPIND1P05546 499 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PRSS56P0CW18 603 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ACSL1P33121 698 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 RFC3P40938 356 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 FNTBP49356 437 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 DGKGP49619 791 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 LMAN2Q12907 356 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MADCAM1Q13477 382 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SPHARQ15513 63 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SMAD2Q15796 467 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 AVPI1Q5T686 147 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PLAG1Q6DJT9 500 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ELP2Q6IA86 826 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ANGPTL8Q6UXH0 198 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ADCK2Q7Z695 626 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 TRAPPC5Q8IUR0 188 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 OR11H4Q8NGC9 324 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 OR56A4Q8NGH8 313 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PROKR1Q8TCW9 393 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ASZ1Q8WWH4 475 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 KCNJ9Q92806 393 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 KAT2AQ92830 837 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PFDN5Q99471 154 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 COPS8Q99627 209 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 BARD1Q99728 777 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 PRR14Q9BWN1 585 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PAPOLGQ9BWT3 736 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 POLR2J2Q9GZM3 115 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 BTBD1Q9H0C5 482 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MIXL1Q9H2W2 232 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 CWH43Q9H720 699 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 CHMP1AQ9HD42 196 aaPredicted RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 MIOXQ9UGB7 285 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 RPH3AQ9Y2J0 694 aaPredicted RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 PADI2Q9Y2J8 665 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 CASC3O15234 703 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 SDC3O75056 442 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ZDHHC11BP0C7U3 371 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ANXA8P13928 327 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ITGB7P26010 798 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 HOXA9P31269 272 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 RPL34P49207 117 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 ZNF33AQ06730 810 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PTPRRQ15256 657 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SSX2Q16385 188 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SGCAQ16586 387 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 C6orf136Q5SQH8 315 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ATAT1Q5SQI0 421 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 FGD2Q7Z6J4 655 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 B3GNT7Q8NFL0 401 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 METTL6Q8TCB7 284 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 CHTF18Q8WVB6 975 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ART5Q96L15 291 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 KCNA7Q96RP8 456 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 HBEGFQ99075 208 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SLC46A2Q9BY10 475 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 GABARAPL3Q9BY60 117 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MTG2Q9H4K7 406 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SH3BP4Q9P0V3 963 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MARCH4Q9P2E8 410 aaPredicted RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 POFUT2Q9Y2G5 429 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PLXNA1Q9UIW2 1896 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MAP1BP46821 2468 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 MEIKINA0A087WXM9 373 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 ADAMDEC1O15204 470 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SMAD6O43541 496 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 GREM1O60565 184 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SLC19A2O60779 497 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SLC25A14O95258 325 aaPredicted RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 EPHX1P07099 455 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SELLP14151 372 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 CD70P32970 193 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 RGRP47804 291 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SGSHP51688 502 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 EPHA4P54764 986 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PTPN5P54829 565 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 FOXA1P55317 472 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 VSX2P58304 361 aaPredicted RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 AP1S1P61966 158 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MAD2L1Q13257 205 aaPredicted RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 CAMK2DQ13557 499 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 NR6A1Q15406 480 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 MANEALQ5VSG8 457 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 PAQR3Q6TCH7 311 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SSX9Q7RTT3 188 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 RD3Q7Z3Z2 195 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 TRMT11Q7Z4G4 463 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 STPG2Q8N412 459 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 IL17RCQ8NAC3 791 aa7.44□□□□□ -1.22
SIK3-203ENST00000415541 SETD7Q8WTS6 366 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 TRMT2BQ96GJ1 504 aaKnown RBP7.44□□□□□ -1.22
SIK3-203ENST00000415541 ZNF599Q96NL3 588 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms