RNA–Protein interactions for RNA: ENST00000414893.5

CAP1-208, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, human

TSL 3

Gene CAP1, Length 528 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAP1-208	ENST00000414893	CPSF2	Q9P2I0	782 aa	Known RBP	12.5	□□□□□ -0.41
CAP1-208	ENST00000414893	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.5	□□□□□ -0.41
CAP1-208	ENST00000414893	C2orf72	A6NCS6	295 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	MBD3L3	A6NE82	208 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	CLCA1	A8K7I4	914 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	FOXE1	O00358	373 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	SIX3	O95343	332 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	CLDN9	O95484	217 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	C2	P06681	752 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	ABCB1	P08183	1280 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	CYP4B1	P13584	511 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	CPM	P14384	443 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	ABCD3	P28288	659 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	GCK	P35557	465 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	NAGLU	P54802	743 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	POU4F3	Q15319	338 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	PCBP2	Q15366	365 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	NNAT	Q16517	81 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	NHSL2	Q5HYW2	709 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	TTC19	Q6DKK2	380 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	KLC3	Q6P597	504 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	L3MBTL4	Q8NA19	623 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	C9orf106	Q8NAJ2	232 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	WFDC11	Q8NEX6	87 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	OR7G1	Q8NGA0	311 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	WDR20	Q8TBZ3	569 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	CDK15	Q96Q40	435 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	BRINP2	Q9C0B6	783 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	NXF5	Q9H1B4	397 aa	Known RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	PSD3	Q9NYI0	1048 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	BCAP29	Q9UHQ4	241 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	TNPO3	Q9Y5L0	923 aa	Known RBP	12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	DOCK7	Q96N67	2140 aa		12.49	□□□□□ -0.41
CAP1-208	ENST00000414893	CDH16	O75309	829 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	ERN1	O75460	977 aa	Known RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	PPM1B	O75688	479 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	SEMA3D	O95025	777 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	IL18BP	O95998	194 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	ACTL6A	O96019	429 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	POR	P16435	677 aa	Predicted RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	GPX3	P22352	226 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	PTPN6	P29350	595 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	DEK	P35659	375 aa	Known RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	CPA2	P48052	419 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	CCNG1	P51959	295 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	SORD	Q00796	357 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	CAV1	Q03135	178 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	SRY	Q05066	204 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	C2orf54	Q08AI8	447 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	NAB1	Q13506	487 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	ACAP2	Q15057	778 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	UAP1	Q16222	522 aa	Predicted RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	SGO1	Q5FBB7	561 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	CCNYL2	Q5T2Q4	361 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	DESI1	Q6ICB0	168 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893		Q71RC1	249 aa	Predicted RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	CCDC91	Q7Z6B0	441 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	C17orf47	Q8NEP4	570 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	SPATA4	Q8NEY3	305 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	RDH11	Q8TC12	318 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	ZPLD1	Q8TCW7	415 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	RBM24	Q9BX46	236 aa	Known RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	NOL11	Q9H8H0	719 aa	Known RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	PLEKHF2	Q9H8W4	249 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	NEUROD4	Q9HD90	331 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	AHSP	Q9NZD4	102 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	DTX4	Q9Y2E6	619 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	UTP11	Q9Y3A2	253 aa	Known RBP	12.48	□□□□□ -0.41
CAP1-208	ENST00000414893	ABCA2	Q9BZC7	2435 aa		12.48	□□□□□ -0.41
CAP1-208	ENST00000414893		A0A096LPK6	155 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	CCDC189	A1A4V9	331 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893		H0Y3Z8	333 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	ICOSLG	O75144	302 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	KLHL2	O95198	593 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	S1PR1	P21453	382 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	SLCO1A2	P46721	670 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	MAPK12	P53778	367 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	LTB	Q06643	244 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	PLCXD2	Q0VAA5	305 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	FOXF2	Q12947	444 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	EXOSC7	Q15024	291 aa	Known RBP	12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	FRG2	Q64ET8	278 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	SLC30A6	Q6NXT4	461 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	FAM111B	Q6SJ93	734 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	PAGE2	Q7Z2X7	111 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	NUP54	Q7Z3B4	507 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	LUZP2	Q86TE4	346 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	VWA5B2	Q8N398	1253 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	OR52B6	Q8NGF0	335 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	OR14L1P	Q8NHC6	308 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	FBXO25	Q8TCJ0	367 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	SLC44A1	Q8WWI5	657 aa		12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	INTS12	Q96CB8	462 aa	Known RBP	12.47	□□□□□ -0.41
CAP1-208	ENST00000414893	OMA1	Q96E52	524 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms