RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 FRG2CA6NGY1 282 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 TMEM200CA6NKL6 621 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 KLRC4-KLRK1H3BQV0 150 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 HRKO00198 91 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 SDHDO14521 159 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 PRKNO60260 465 aaPredicted RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 NME2P1O60361 137 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 MAN1A2O60476 641 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 NEURL1O76050 574 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 SP1P08047 785 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 CT62P0C5K7 136 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 G6PDP11413 515 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 NAGAP17050 411 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 NME2P22392 152 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 FRKP42685 505 aaPredicted RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 MANFP55145 182 aaKnown RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 PRR5P85299 388 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 LRRC74AQ0VAA2 488 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 MGAT2Q10469 447 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 PTGR1Q14914 329 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 RPS6KA2Q15349 733 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 INPP5JQ15735 1006 aaPredicted RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 LSM12Q3MHD2 195 aaKnown RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 VPS26BQ4G0F5 336 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 NXNQ6DKJ4 435 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 OR2L13Q8N349 312 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 ZNF441Q8N8Z8 693 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 CATSPER1Q8NEC5 780 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 VPS37AQ8NEZ2 397 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 ADCY4Q8NFM4 1077 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 CEP70Q8NHQ1 597 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 STON2Q8WXE9 905 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 TESCQ96BS2 214 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 SPACA9Q96E40 222 aaPredicted RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 HSPBAP1Q96EW2 488 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 MAELQ96JY0 434 aaKnown RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 ZBTB18Q99592 522 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 DPY30Q9C005 99 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 GLIPR2Q9H4G4 154 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 C3orf14Q9HBI5 128 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 ANKRD10Q9NXR5 420 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 GIMAP2Q9UG22 337 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
LIMS1-206ENST00000414829 USH1CQ9Y6N9 552 aa13.55□□□□□ -0.24
LIMS1-206ENST00000414829 TCP11X1B4DZS4 312 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 TP53I11O14683 189 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 POLR3GO15318 223 aaPredicted RBP13.54□□□□□ -0.24
LIMS1-206ENST00000414829 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 ABCB7O75027 752 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 SOX30O94993 753 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 CBX7O95931 251 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 F10P00742 488 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 CLPSP04118 112 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 S1PR1P21453 382 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 DRD5P21918 477 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 GPX3P22352 226 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 EPHA3P29320 983 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 KRT20P35900 424 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 SOX3P41225 446 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 MC3RP41968 323 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 PPICP45877 212 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 MRPS22P82650 360 aaKnown RBP13.54□□□□□ -0.24
LIMS1-206ENST00000414829 MRPS35P82673 323 aaKnown RBP13.54□□□□□ -0.24
LIMS1-206ENST00000414829 HSPB3Q12988 150 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 MAPKAPK3Q16644 382 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 GSTA3Q16772 222 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 TBCELQ5QJ74 424 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 ANXA8L1Q5VT79 327 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 SPINK14Q6IE38 97 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 FAM180BQ6P0A1 224 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 BHLHB9Q6PI77 547 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 FAM111BQ6SJ93 734 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 GLB1L3Q8NCI6 653 aaPredicted RBP13.54□□□□□ -0.24
LIMS1-206ENST00000414829 PSD4Q8NDX1 1056 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 OR5P2Q8WZ92 322 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 MOAP1Q96BY2 351 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 LCORQ96JN0 433 aaPredicted RBP13.54□□□□□ -0.24
LIMS1-206ENST00000414829 MS4A4EQ96PG1 132 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 SIGLEC12Q96PQ1 595 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 BTBD9Q96Q07 612 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 SECISBP2Q96T21 854 aaKnown RBP13.54□□□□□ -0.24
LIMS1-206ENST00000414829 CNIH4Q9P003 139 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 LUZP4Q9P127 313 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 VPS4AQ9UN37 437 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 C19orf53Q9UNZ5 99 aaPredicted RBP13.54□□□□□ -0.24
LIMS1-206ENST00000414829 BSNQ9UPA5 3926 aa13.54□□□□□ -0.24
LIMS1-206ENST00000414829 A0A1W2PRB8 838 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 E9PBE3 544 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 J3QKU1 62 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 DYNC1I1O14576 645 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 ERN1O75460 977 aaKnown RBP13.53□□□□□ -0.24
LIMS1-206ENST00000414829 OR6B1O95007 311 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 P04436 131 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 KRT16P08779 473 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 FBXO45P0C2W1 286 aa13.53□□□□□ -0.24
LIMS1-206ENST00000414829 KIR3DL1P43629 444 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms