RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DCKP27707 260 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 RBM34P42696 430 aaKnown RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 SOX9P48436 509 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 ACTA2P62736 377 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 ACTG2P63267 376 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 C18orf21Q32NC0 220 aaPredicted RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 GPR137CQ8N3F9 429 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF432O94892 652 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 PRKCAP17252 672 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 CTSCP53634 463 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 ALG10BQ5I7T1 473 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 C1orf94Q6P1W5 598 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 SPATC1Q76KD6 591 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 OR2A12Q8NGT7 310 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 MYNNQ9NPC7 610 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 TBC1D24Q9ULP9 559 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 NRAPQ86VF7 1730 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 ERCC1P07992 297 aaPredicted RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 PABPC4LP0CB38 370 aaKnown RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 CAPZA1P52907 286 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 RPS26P62854 115 aaKnown RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 TLDC1Q6P9B6 456 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 GPR149Q86SP6 731 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 CLECL1Q8IZS7 167 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 NEIL2Q969S2 332 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 TUBA1CQ9BQE3 449 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 MKLN1Q9UL63 735 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 C2orf92A0A1B0GVN3 265 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 CDRT1O95170 752 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF888P0CJ79 500 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-202ENST00000413872 PGGT1BP53609 377 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 GTF2IRD2BQ6EKJ0 949 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF782Q6ZMW2 699 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-202ENST00000413872 GAREM2Q75VX8 874 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 UBE2Q1Q7Z7E8 422 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 GTF2IRD2Q86UP8 949 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 SLC44A3Q8N4M1 653 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 OR2T4Q8NH00 348 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ACSL6Q9UKU0 697 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 FTCDNL1E5RQL4 147 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 AURKAO14965 403 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 CDC40O60508 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
PHRF1-202ENST00000413872 PXNP49023 591 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ARPC4P59998 168 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 MADCAM1Q13477 382 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 LAPTM4AQ15012 233 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 VWA5B2Q8N398 1253 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 SLX4Q8IY92 1834 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 MYH9P35579 1960 aaKnown RBP16.41■□□□□ 0.22
PHRF1-202ENST00000413872 TOR1BO14657 336 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 EDIL3O43854 480 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 JRKO75564 520 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 CLPXO76031 633 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 IGHEP01854 428 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 CERS1P27544 350 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 CCR7P32248 378 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 EIF2DP41214 584 aaKnown RBP16.41■□□□□ 0.22
PHRF1-202ENST00000413872 MLF2Q15773 248 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-202ENST00000413872 LPAL2Q16609 132 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 BTBD16Q32M84 506 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 NADK2Q4G0N4 442 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF554Q86TJ5 538 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 TEX26Q8N6G2 289 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 OR13J1Q8NGT2 312 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 HDAC8Q9BY41 377 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ENPP4Q9Y6X5 453 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 MYOCOSA0A1B0GUC4 107 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 OR14I1A6ND48 311 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 CCRL2O00421 344 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 TUBB3Q13509 450 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 TAZQ16635 292 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF565Q8N9K5 539 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 CREB3L4Q8TEY5 395 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 ASB11Q8WXH4 323 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 FBXL20Q96IG2 436 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 PFDN2Q9UHV9 154 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 SIT1Q9Y3P8 196 aa16.41■□□□□ 0.22
PHRF1-202ENST00000413872 SRPX2O60687 465 aaPredicted RBP16.4■□□□□ 0.22
PHRF1-202ENST00000413872 AHRP35869 848 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 RGRP47804 291 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 VEZF1Q14119 521 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 CEP76Q8TAP6 659 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 DPH2Q9BQC3 489 aaPredicted RBP16.4■□□□□ 0.22
PHRF1-202ENST00000413872 KCNK12Q9HB15 430 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 C1orf105O95561 183 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 RETP07949 1114 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 DHRS4L1P0CG22 281 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 GNG2P59768 71 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 DCDC1P59894 354 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 ST3GAL4Q11206 333 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 ACOT4Q8N9L9 421 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 NKX1-2Q9UD57 310 aaPredicted RBP16.4■□□□□ 0.22
PHRF1-202ENST00000413872 ANTXRLA6NF34 631 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 H3BUI4 141 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 ATXN1LP0C7T5 689 aaKnown RBP16.4■□□□□ 0.22
PHRF1-202ENST00000413872 PNMTP11086 282 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 GRK5P34947 590 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 ADRA1AP35348 466 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 INHBCP55103 352 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms