RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 LIMS4P0CW20 117 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 MAPK12P53778 367 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 IL18Q14116 193 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 P2RY14Q15391 338 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 CEP78Q5JTW2 689 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-202ENST00000413219 TRILQ7L0X0 811 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 ADGRF3Q8IZF5 1079 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 MORN4Q8NDC4 146 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 ZNF740Q8NDX6 193 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 UPRTQ96BW1 309 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 TM4SF18Q96CE8 201 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 AP2M1Q96CW1 435 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 TREX2Q9BQ50 279 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-202ENST00000413219 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-202ENST00000413219 CLCA3PQ9Y6N3 262 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 LEFTY2O00292 366 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 PLPP1O14494 284 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 HLA-DPB1P04440 258 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 ARSBP15848 533 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 BTG1P62324 171 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 ACSM1Q08AH1 577 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 DSG2Q14126 1118 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 LAMTOR1Q6IAA8 161 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 RFPL4BQ6ZWI9 263 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 GAREM2Q75VX8 874 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 IQCHQ86VS3 1027 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 NRSN1Q8IZ57 195 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 ARIH2OSQ8N7S6 290 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 CREB3L1Q96BA8 519 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 HYLS1Q96M11 299 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 PRRC1Q96M27 445 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 POLHQ9Y253 713 aa16.65■□□□□ 0.26
SDCBP-202ENST00000413219 CCDC88CQ9P219 2028 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 TRAV19A0A0A6YYK7 116 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 SMIM30A4D0T7 59 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 CAV3P56539 151 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 MRPL28Q13084 256 aaKnown RBP16.64■□□□□ 0.25
SDCBP-202ENST00000413219 TMEM44Q2T9K0 475 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 CCNJQ5T5M9 372 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 TYW3Q6IPR3 259 aaKnown RBP16.64■□□□□ 0.25
SDCBP-202ENST00000413219 SLC27A4Q6P1M0 643 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 LCTLQ6UWM7 567 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 PRICKLE2Q7Z3G6 844 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 FAM129CQ86XR2 697 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 CCDC28AQ8IWP9 274 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 OR5H6Q8NGV6 325 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 TEX47Q8TBZ9 253 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 AKAP1Q92667 903 aaKnown RBP eCLIP16.64■□□□□ 0.25
SDCBP-202ENST00000413219 SLC38A2Q96QD8 506 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 SPATA5L1Q9BVQ7 753 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 ZNF717Q9BY31 904 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-202ENST00000413219 RHBGQ9H310 441 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 ACSS1Q9NUB1 689 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-202ENST00000413219 MCUBQ9NWR8 336 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 MRPL39Q9NYK5 338 aaKnown RBP16.64■□□□□ 0.25
SDCBP-202ENST00000413219 CDH10Q9Y6N8 788 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 CASP8AP2Q9UKL3 1982 aa16.64■□□□□ 0.25
SDCBP-202ENST00000413219 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.63■□□□□ 0.25
SDCBP-202ENST00000413219 M0R3H8 397 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ICMTO60725 284 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 LEFTY1O75610 366 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 GALP22466 123 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 PPP2R1BP30154 601 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 INPP1P49441 399 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 MLC1Q15049 377 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 PRAMEF14Q5SWL7 426 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 PRAMEF13Q5VWM6 474 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 KHDRBS2Q5VWX1 349 aaKnown RBP16.63■□□□□ 0.25
SDCBP-202ENST00000413219 FAM180BQ6P0A1 224 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 FAM83HQ6ZRV2 1179 aaPredicted RBP16.63■□□□□ 0.25
SDCBP-202ENST00000413219 GLCCI1Q86VQ1 547 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 KIF18BQ86Y91 864 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 TMC8Q8IU68 726 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 CFAP206Q8IYR0 622 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ELMOD2Q8IZ81 293 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ANKK1Q8NFD2 765 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 OR4M1Q8NGD0 313 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ACOT12Q8WYK0 555 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 GPA33Q99795 319 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 SERHL2Q9H4I8 314 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 NT5DC2Q9H857 520 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ASB6Q9NWX5 421 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 B3GNT2Q9NY97 397 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 CLCA2Q9UQC9 943 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 WASHC1A8K0Z3 465 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 INMT-MINDY4F8WBC2 141 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 AKR7A2O43488 359 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 CHST10O43529 356 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 UBXN7O94888 489 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 BSGP35613 385 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 SLC1A3P43003 542 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 CCT3P49368 545 aaKnown RBP16.63■□□□□ 0.25
SDCBP-202ENST00000413219 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 HSPB3Q12988 150 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ADAM15Q13444 863 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ANGPT1Q15389 498 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 SYPL1Q16563 259 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 BICRALQ6AI39 1079 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 ZNF557Q8N988 423 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms