RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ZNF730Q6ZMV8 503 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 COMMD2Q86X83 199 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 RNF130Q86XS8 419 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 PDSS2Q86YH6 399 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ZDHHC21Q8IVQ6 265 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 FAM20CQ8IXL6 584 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CADM2Q8N3J6 435 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 GPBAR1Q8TDU6 330 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CRB3Q9BUF7 120 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 EDEM2Q9BV94 578 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 NANOGQ9H9S0 305 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 NKX1-2Q9UD57 310 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 MGAT4AQ9UM21 535 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 IFT52Q9Y366 437 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 TNFRSF11BO00300 401 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PPP1R2P9O14990 202 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 BRINP1O60477 761 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SLITRK5O94991 958 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 CCNA2P20248 432 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TALDO1P37837 337 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 CAPZBP47756 277 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 GMFBP60983 142 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 MAPK11Q15759 364 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 C6orf120Q7Z4R8 191 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF595Q8IYB9 648 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 LSMEM2Q8N112 164 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 COMMD9Q9P000 198 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 NXT1Q9UKK6 140 aaKnown RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 NAALAD2Q9Y3Q0 740 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ZDBF2Q9HCK1 2354 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 M0QX08 132 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TMCC2O75069 709 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 T-ENOLP0DO92 83 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 RYKP34925 604 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 RPL4P36578 427 aaKnown RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 OR1D5P58170 312 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TUBA4AP68366 448 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 MESP2Q0VG99 397 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SCGB2A2Q13296 93 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ENPP2Q13822 863 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 MAD2L1BPQ15013 274 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF311Q5JNZ3 666 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 IER5LQ5T953 404 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 LINC00471Q8N535 108 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 CCL4L1Q8NHW4 92 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TEX47Q8TBZ9 253 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TMEM125Q96AQ2 219 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 FKBP10Q96AY3 582 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TESCQ96BS2 214 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 S100A13Q99584 98 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 COQ10BQ9H8M1 238 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PISDQ9UG56 409 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ICKQ9UPZ9 632 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SNX11Q9Y5W9 270 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 RNASET2O00584 256 aaKnown RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 HAT1O14929 419 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 KDM4BO94953 1096 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 MED26O95402 600 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PAPLNO95428 1278 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TSPAN12O95859 305 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 IGHEP01854 428 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 LAMP1P11279 417 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 CDK4P11802 303 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 HSD17B1P14061 328 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TCEA1P23193 301 aaKnown RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 IGFBP5P24593 272 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 FOLR3P41439 243 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 XCR1P46094 333 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 CDK9P50750 372 aaKnown RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 HYAL2Q12891 473 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 DAG1Q14118 895 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 RBM44Q6ZP01 1051 aaKnown RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 AMER2Q8N7J2 671 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SLC22A8Q8TCC7 542 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TBC1D20Q96BZ9 403 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TAPBPLQ9BX59 468 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 DGCR6LQ9BY27 220 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PRDM6Q9NQX0 595 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SERINC1Q9NRX5 453 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 KNTC1P50748 2209 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 EFCAB7A8K855 629 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF891A8MT65 544 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SSX4O60224 188 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PRAMEF2O60811 474 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SCRG1O75711 98 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 GNB3P16520 340 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 IL18R1Q13478 541 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 LAIR1Q6GTX8 287 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 KBTBD8Q8NFY9 601 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PIGXQ8TBF5 258 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 SLC39A3Q9BRY0 314 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 ALOXE3Q9BYJ1 711 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 TRIM2Q9C040 744 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 MARCH7Q9H992 704 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PCDHGA5Q9Y5G8 931 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 PCDHGA4Q9Y5G9 962 aa8.07□□□□□ -1.12
SYNE1-211ENST00000413186 MAGED1Q9Y5V3 778 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms