RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 APOHP02749 345 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 HLA-DQB2P05538 268 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 TUBBP07437 444 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 CCNB1P14635 433 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 MMP9P14780 707 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 IL9P15248 144 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 H2AFXP16104 143 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 TPSB2P20231 275 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 GDI1P31150 447 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 FDFT1P37268 417 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 EIF2DP41214 584 aaKnown RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 MAGEA3P43357 314 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 SLC15A1P46059 708 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 SERPINH1P50454 418 aaKnown RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 ATP12AP54707 1039 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 MFAP4P55083 255 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 PMP22Q01453 160 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 GUCY2DQ02846 1103 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 CUL1Q13616 776 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 RUNX3Q13761 415 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 DMC1Q14565 340 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 KCNJ11Q14654 390 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 RFTN1Q14699 578 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 MORF4L2Q15014 288 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 CYTH1Q15438 398 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 TRIP13Q15645 432 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 TPSAB1Q15661 275 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 PARP6Q2NL67 630 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 FUT11Q495W5 492 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 TECRLQ5HYJ1 363 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 ANKRD22Q5VYY1 191 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 LINGO4Q6UY18 593 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 C4orf22Q6V702 233 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 ADIPOR2Q86V24 386 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 HOOK3Q86VS8 718 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 PTOV1Q86YD1 416 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 IFT20Q8IY31 132 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 SPEM1Q8N4L4 309 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 BBOF1Q8ND07 529 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 CCNYQ8ND76 341 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 FBXO25Q8TCJ0 367 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 AENQ8WTP8 325 aaKnown RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 ANKRD7Q92527 254 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 PRCCQ92733 491 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 IMP4Q96G21 291 aaKnown RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 SNF8Q96H20 258 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 NSMCE3Q96MG7 304 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 PSKH2Q96QS6 385 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 XPO6Q96QU8 1125 aaKnown RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 DDOQ99489 341 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 MGME1Q9BQP7 344 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 HGH1Q9BTY7 390 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 MLPHQ9BV36 600 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 TXLNGYQ9BZA5 131 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 FAM129AQ9BZQ8 928 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 RTN4RQ9BZR6 473 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 GBA3Q9H227 469 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 PPIL3Q9H2H8 161 aaKnown RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 DPH5Q9H2P9 285 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 DENND2DQ9H6A0 471 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 FAM114A2Q9NRY5 505 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 ABCB8Q9NUT2 735 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 PSD3Q9NYI0 1048 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 GTSE1Q9NYZ3 720 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 VPS28Q9UK41 221 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 FAF1Q9UNN5 650 aaPredicted RBP3.93□□□□□ -1.78
CLK1-203ENST00000409769 HS3ST2Q9Y278 367 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 SNX24Q9Y343 169 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 LRRK1Q38SD2 2015 aa3.93□□□□□ -1.78
CLK1-203ENST00000409769 DOCK9Q9BZ29 2069 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 LOC730098B7Z3J9 87 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 PLK4O00444 970 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 NDC80O14777 642 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 PCDH7O60245 1069 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 ZG16O60844 167 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 ZNF821O75541 412 aaPredicted RBP3.92□□□□□ -1.78
CLK1-203ENST00000409769 GJB3O75712 270 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 RSL1D1O76021 490 aaKnown RBP3.92□□□□□ -1.78
CLK1-203ENST00000409769 JCHAINP01591 159 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 LIPFP07098 398 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 SP100P23497 879 aaPredicted RBP3.92□□□□□ -1.78
CLK1-203ENST00000409769 PSMB4P28070 264 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 ADRA1AP35348 466 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 ACTN2P35609 894 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 HSPA9P38646 679 aaKnown RBP3.92□□□□□ -1.78
CLK1-203ENST00000409769 GRIA1P42261 906 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 RGRP47804 291 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 CSNK1DP48730 415 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 SUOXP51687 545 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 PLTPP55058 493 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 CD81P60033 236 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 MAXP61244 160 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 SIRPAP78324 504 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 CAV1Q03135 178 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 SULT2A1Q06520 285 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 MFAP5Q13361 173 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 MSLNQ13421 630 aaPredicted RBP3.92□□□□□ -1.78
CLK1-203ENST00000409769 ENPP2Q13822 863 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 ITPRIPL2Q3MIP1 535 aa3.92□□□□□ -1.78
CLK1-203ENST00000409769 BEND6Q5SZJ8 279 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms