RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TEX10Q9NXF1 929 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 TRMT112Q9UI30 125 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 MGAT4BQ9UQ53 548 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 WIPI2Q9Y4P8 454 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 GLI3P10071 1580 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 SMCHD1A6NHR9 2005 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 SCN11AQ9UI33 1791 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 A0A087WZY1 265 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 VPS37CA5D8V6 355 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 C15orf61A6NNL5 157 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 ANGPT2O15123 496 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRT86O43790 486 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 PFKFB2O60825 505 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 PTBP3O95758 552 aaKnown RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 RPLP0P05388 317 aaKnown RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 HSPD1P10809 573 aaKnown RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 GP9P14770 177 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CEBPBP17676 345 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 TNNI3P19429 210 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 GPX3P22352 226 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 GLRA1P23415 457 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 TMOD1P28289 359 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CHRNB4P30926 498 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 PRPHP41219 470 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 FHITP49789 147 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 HSD17B7P56937 341 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 UBE2HP62256 183 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CSNK2BP67870 215 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CCDC173Q0VFZ6 552 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 BTG3Q14201 252 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRT81Q14533 505 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CEBPEQ15744 281 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 SHROOM1Q2M3G4 852 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 FFAR4Q5NUL3 377 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 WLSQ5T9L3 541 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 STOX1Q6ZVD7 989 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 BNIPLQ7Z465 357 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 SLC22A16Q86VW1 577 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CACUL1Q86Y37 369 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 MISPQ8IVT2 679 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 APLFQ8IW19 511 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 FBXL16Q8N461 479 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CERS5Q8N5B7 392 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 MLKLQ8NB16 471 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 ICA1LQ8NDH6 482 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 OR6F1Q8NGZ6 308 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 RPLP0P6Q8NHW5 317 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 PHYHIPQ92561 330 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 ANP32BQ92688 251 aaKnown RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 NCLNQ969V3 563 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 VPS39Q96JC1 886 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 INPP4AQ96PE3 977 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 RAB40CQ96S21 281 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRT12Q99456 494 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 LLPHQ9BRT6 129 aaKnown RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 DCTN5Q9BTE1 182 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 WRAP53Q9BUR4 548 aaKnown RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 PINK1Q9BXM7 581 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 TSPY26PQ9H489 355 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 FNDC4Q9H6D8 234 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 ROPN1Q9HAT0 212 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 VAT1LQ9HCJ6 419 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 RRAGDQ9NQL2 400 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 GDF3Q9NR23 364 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 KLHL8Q9P2G9 620 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 IL20RAQ9UHF4 553 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CTNNA3Q9UI47 895 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 ICAM5Q9UMF0 924 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 DIMT1Q9UNQ2 313 aaKnown RBP4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 CACNA1FO60840 1977 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 C5P01031 1676 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 ABCC12Q96J65 1359 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 STRCQ7RTU9 1775 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 RGPD5Q99666 1765 aa4.12□□□□□ -1.75
HMGB3P18-201ENST00000406327 FAM230AA0A1W2PPH8 454 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TMEM89A2RUT3 159 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TMCO5BA8MYB1 307 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 E7EWF7 191 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 LGALS8O00214 317 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 INPP4BO15327 924 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 SIGLEC5O15389 551 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 CFLARO15519 480 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 KCNAB3O43448 404 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 B4GAT1O43505 415 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 NXPH2O95156 264 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 DIRAS3O95661 229 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 ANGPTL1O95841 491 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 AK1P00568 194 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 IGHEP01854 428 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 RRASP10301 218 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 CEACAM1P13688 526 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 PRDX6P30041 224 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 RPL9P32969 192 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TIMP3P35625 211 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 MAP2K2P36507 400 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 MATKP42679 507 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 LIMK2P53671 638 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 BACE1P56817 501 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms