RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 CDH2P19022 906 aaPredicted RBP27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 PPP2R1BP30154 601 aa27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 TLX1P31314 330 aaPredicted RBP27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 FASLGP48023 281 aa27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 C19orf47Q8N9M1 422 aaKnown RBP27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 AVL9Q8NBF6 648 aa27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 OR9Q2Q8NGE9 314 aa27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 VANGL1Q8TAA9 524 aaPredicted RBP27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 CCDC3Q9BQI4 270 aa27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 BCL2L10Q9HD36 194 aa27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 CCDC88CQ9P219 2028 aa27.2■■□□□ 1.94
CSNK1E-205ENST00000405675 HRO43593 1189 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 EEF1B2P24534 225 aaKnown RBP27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 SOX18P35713 384 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 HMGA2P52926 109 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 CRISP3P54108 245 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 NPRL3Q12980 569 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 CDK5R2Q13319 367 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 MANEAQ5SRI9 462 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 ZNF773Q6PK81 442 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 CCDC71Q8IV32 467 aaPredicted RBP27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 NCSTNQ92542 709 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 ZNF354BQ96LW1 612 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 DDX18Q9NVP1 670 aaKnown RBP27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 MS4A12Q9NXJ0 267 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 KCND3Q9UK17 655 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 A0A0C4DFX4 3053 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 BDP1A6H8Y1 2624 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 SERPINB7O75635 380 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 PIAS2O75928 621 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 Q6ZPB1 254 aaPredicted RBP27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 KCTD8Q6ZWB6 473 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 BBS10Q8TAM1 723 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 DOK4Q8TEW6 326 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 NIPSNAP1Q9BPW8 284 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 GABARAPL3Q9BY60 117 aa27.19■■□□□ 1.94
CSNK1E-205ENST00000405675 LMO7DNF2Z398 122 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 FAM227AF5H4B4 570 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 GADD45GO95257 159 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 ANXA11P50995 505 aaKnown RBP27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 SHC2P98077 582 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 LAIR1Q6GTX8 287 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 TCTN3Q6NUS6 607 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 USP53Q70EK8 1073 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 CA13Q8N1Q1 262 aa27.18■■□□□ 1.94
CSNK1E-205ENST00000405675 SGK494L7N484 410 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 CYR61O00622 381 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 EPPINO95925 133 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 CPMP14384 443 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 RPP38P78345 283 aaKnown RBP27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 PLK5Q496M5 336 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 GPAT3Q53EU6 434 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 ARHGEF39Q8N4T4 335 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 MAP3K3Q99759 626 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 POLR1BQ9H9Y6 1135 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 FGF17O60258 216 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 LDB3O75112 727 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 BNC1Q01954 994 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 PIGFQ07326 219 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 PMS2P3Q13401 168 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 KRT73Q86Y46 540 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 MCATQ8IVS2 390 aaKnown RBP27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 SETD9Q8NE22 299 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 PITX2Q99697 317 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 QRSL1Q9H0R6 528 aaKnown RBP27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 PAPOLBQ9NRJ5 636 aaKnown RBP27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 ZDBF2Q9HCK1 2354 aa27.17■■□□□ 1.94
CSNK1E-205ENST00000405675 SLC1A7O00341 560 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 PROS1P07225 676 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 HTR1AP08908 422 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 PEX19P40855 299 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 CAPZBP47756 277 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 BNIP3Q12983 259 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 DEF8Q6ZN54 512 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 FAM92BQ6ZTR7 304 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 DTWD2Q8NBA8 298 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 UBE2FQ969M7 185 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 ACTRT3Q9BYD9 372 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 NTMQ9P121 344 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 M0R3H8 397 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 ANXA8P13928 327 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 CTSKP43235 329 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 C17orf82Q86X59 251 aaPredicted RBP27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 SAMD14Q8IZD0 417 aaPredicted RBP27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 PHF10Q8WUB8 498 aaKnown RBP27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 RASSF5Q8WWW0 418 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 SLC35A4Q96G79 324 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 ALPK1Q96QP1 1244 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 SLC38A3Q99624 504 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 PRDM9Q9NQV7 894 aa27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 PAK1IP1Q9NWT1 392 aaPredicted RBP27.16■■□□□ 1.94
CSNK1E-205ENST00000405675 SCN2AQ99250 2005 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 TRBV4-1A0A0J9YWV2 114 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 MED26O95402 600 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 GNSP15586 552 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 FMO3P31513 532 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 MFSD12Q6NUT3 480 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 GPR141Q7Z602 305 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 B3GNT8Q7Z7M8 397 aa27.15■■□□□ 1.94
CSNK1E-205ENST00000405675 BPIFB6Q8NFQ5 453 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms