RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 KCNE1P15382 129 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 DOC2AQ14183 400 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 NFATC4Q14934 902 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 METTL2BQ6P1Q9 378 aaKnown RBP13.11□□□□□ -0.31
VAPA-202ENST00000400000 ALDH16A1Q8IZ83 802 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 TRAM1L1Q8N609 369 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 INPP5KQ9BT40 448 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 RPH3ALQ9UNE2 315 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 RIDAP52758 137 aaKnown RBP13.11□□□□□ -0.31
VAPA-202ENST00000400000 ZNF616Q08AN1 781 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 CYP1B1Q16678 543 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 ZNF551Q7Z340 670 aaPredicted RBP13.11□□□□□ -0.31
VAPA-202ENST00000400000 MUS81Q96NY9 551 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 SLC17A9Q9BYT1 436 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
VAPA-202ENST00000400000 FAM230AA0A1W2PPH8 454 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 LCATP04180 440 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 STSP08842 583 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 ZNF182P17025 639 aaPredicted RBP13.11□□□□□ -0.31
VAPA-202ENST00000400000 AKR1C2P52895 323 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 HOXC5Q00444 222 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 GNMTQ14749 295 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 SPAG16Q8N0X2 631 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 EID2Q8N6I1 236 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 OR5D16Q8NGK9 328 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 OR9A2Q8NGT5 310 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 AP1S3Q96PC3 154 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 MYH8P13535 1937 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 RORAP35398 523 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 CTXN1P60606 82 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 HSD11B2P80365 405 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 GBX1Q14549 363 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 GRIN2CQ14957 1233 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 ZNF630Q2M218 657 aaPredicted RBP13.1□□□□□ -0.31
VAPA-202ENST00000400000 ABHD17BQ5VST6 288 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 KLHDC8AQ8IYD2 350 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 CYB561A3Q8NBI2 242 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 C2orf42Q9NWW7 574 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 NFS1Q9Y697 457 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 TCHHQ07283 1943 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 EMC8O43402 210 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 FMO6PO60774 539 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 NPR2P20594 1047 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 SSTP61278 116 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 LRIF1Q5T3J3 769 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 NPY6RQ99463 290 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 RNF38Q9H0F5 515 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 FAM234AQ9H0X4 552 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 AQP12BA6NM10 295 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 IFNA7P01567 189 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 PORP16435 677 aaPredicted RBP13.1□□□□□ -0.31
VAPA-202ENST00000400000 HMBOX1Q6NT76 420 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.312e-8■□□□□ 10.2
VAPA-202ENST00000400000 TAS1R1Q7RTX1 841 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 AQP12AQ8IXF9 295 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 RNF175Q8N4F7 328 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 OR52N2Q8NGI0 321 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 OR51T1Q8NGJ9 327 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 C16orf70Q9BSU1 422 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 LRRN3E7EW58 273 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 CD1DP15813 335 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 GNB3P16520 340 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 FPR1P21462 350 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 GSTM2P28161 218 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 GABRA2P47869 451 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 EEF1A1P68104 462 aaKnown RBP13.1□□□□□ -0.31
VAPA-202ENST00000400000 DRICH1Q6PGQ1 229 aaPredicted RBP13.1□□□□□ -0.31
VAPA-202ENST00000400000 NXPE4Q6UWF7 544 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 DNAJB8Q8NHS0 232 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 HOXB13Q92826 284 aaPredicted RBP13.1□□□□□ -0.31
VAPA-202ENST00000400000 LRRN3Q9H3W5 708 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 MTMR10Q9NXD2 777 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
VAPA-202ENST00000400000 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 CLCA1A8K7I4 914 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 RAB27BO00194 218 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 ANXA3P12429 323 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 RAC2P15153 192 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 EN2P19622 333 aaPredicted RBP13.1□□□□□ -0.31
VAPA-202ENST00000400000 GABRR1P24046 479 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 P2RY2P41231 377 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 OR7A5Q15622 319 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 TOMM40LQ969M1 308 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 C16orf58Q96GQ5 468 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 ACTR3BQ9P1U1 418 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 ACOT7O00154 380 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 PIRO00625 290 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 PMM2O15305 246 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 DPP6P42658 865 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 RHEBQ15382 184 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 DPH1Q9BZG8 443 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 TAS2R3Q9NYW6 316 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 COQ3Q9NZJ6 369 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 COPZ2Q9P299 210 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 MGAT4CQ9UBM8 478 aa13.1□□□□□ -0.31
VAPA-202ENST00000400000 PISDQ9UG56 409 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms