RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 LHX6Q9UPM6 363 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 HEMK1Q9Y5R4 338 aaPredicted RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 PTGDR2Q9Y5Y4 395 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 A0A096LPI6 279 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 IGLV3-32A0A0A0MS00 114 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 TRAV17A0A0B4J275 112 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 A0A1W2PQD3 144 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 A0A1W2PRB8 838 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 OR5H15A6NDH6 313 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 DNAJB5O75953 348 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 PNLIPRP2P54317 469 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 DLX5P56178 289 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 FADDQ13158 208 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ZNF791Q3KP31 576 aaPredicted RBP6.98□□□□□ -1.29
USP16-204ENST00000399976 ZNF385BQ569K4 471 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ACER2Q5QJU3 275 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 MFSD4BQ5TF39 518 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ABHD17BQ5VST6 288 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 SAXO2Q658L1 398 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 CDC73Q6P1J9 531 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 RTL4Q6ZR62 310 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 SLC30A8Q8IWU4 369 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 C9orf40Q8IXQ3 194 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 FBXW8Q8N3Y1 598 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ZADH2Q8N4Q0 377 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 TOR1AIP2Q8NFQ8 470 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 ITCHQ96J02 903 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 NUDT9Q9BW91 350 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 TRIM4Q9C037 500 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 MYLK2Q9H1R3 596 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 EPN3Q9H201 632 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 PCDHGA10Q9Y5H3 936 aa6.98□□□□□ -1.29
USP16-204ENST00000399976 TRBV5-3A0A0A0MS03 114 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 SEC24DO94855 1032 aaPredicted RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 PGRP06401 933 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 DRD4P21917 467 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 EPHA3P29320 983 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 S100A3P33764 101 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 CD97P48960 835 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 SSR4P51571 173 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 NCBP2P52298 156 aaKnown RBP eCLIP6.97□□□□□ -1.299e-8■■■□□ 15.9
USP16-204ENST00000399976 ARFIP2P53365 341 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 NRG3P56975 720 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 HEPHL1Q6MZM0 1159 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 SCIMPQ6UWF3 145 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 MISPQ8IVT2 679 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 PAQR8Q8TEZ7 354 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 OR52B2Q96RD2 323 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 HBEGFQ99075 208 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 NPAS2Q99743 824 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 HOXD1Q9GZZ0 328 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 SLAMF7Q9NQ25 335 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 SUCOQ9UBS9 1254 aaKnown RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 KLF13Q9Y2Y9 288 aaPredicted RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 EML6Q6ZMW3 1958 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 TRBV11-1A0A0K0K1C0 115 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 A0A1W2PP18 115 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 NDUFAB1O14561 156 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 SNX3O60493 162 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 IFNA16P05015 189 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 ADH7P40394 386 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 MAN2A2P49641 1150 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 POLR2JP52435 117 aaKnown RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 GUCY1A3Q02108 690 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 PTGR1Q14914 329 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 TLR1Q15399 786 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 ZNHIT3Q15649 155 aaPredicted RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 TMEM178AQ8NBL3 297 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 FDCSPQ8NFU4 85 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 BRIX1Q8TDN6 353 aaKnown RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 NAF1Q96HR8 494 aaKnown RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 TMEM41AQ96HV5 264 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 EGLN2Q96KS0 407 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 TSSK3Q96PN8 268 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 MESP1Q9BRJ9 268 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 TMEM120AQ9BXJ8 343 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 ACTRT3Q9BYD9 372 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 SAP130Q9H0E3 1048 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 PIGUQ9H490 435 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 FOLH1BQ9HBA9 442 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 PNO1Q9NRX1 252 aaKnown RBP6.97□□□□□ -1.29
USP16-204ENST00000399976 CROCCQ5TZA2 2017 aa6.97□□□□□ -1.29
USP16-204ENST00000399976 UPK1AO00322 258 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 NME2P1O60361 137 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 TSPAN2O60636 221 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 PPM1BO75688 479 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 KRT75O95678 551 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 FAM107AO95990 144 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 NME2P22392 152 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 PTPN6P29350 595 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 TNFSF10P50591 281 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 DUSP8Q13202 625 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 TUBA3CQ13748 450 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 PRSS53Q2L4Q9 553 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 SLC30A6Q6NXT4 461 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 TUBA3EQ6PEY2 450 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 SPATA21Q7Z572 469 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 NET1Q7Z628 596 aaPredicted RBP6.96□□□□□ -1.29
USP16-204ENST00000399976 ANKRD46Q86W74 232 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 C16orf52Q8NHV5 167 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms