RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 MATN3O15232 486 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TLX3O43711 291 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TSPAN2O60636 221 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 UPK3AO75631 287 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ANXA9O76027 345 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 DFFBO76075 338 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GAGE7O76087 117 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 STK17BO94768 372 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 SORBS2O94875 1100 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 NXPH2O95156 264 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 LRATO95237 230 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GNA14O95837 355 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TGM6O95932 706 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 PEX11BO96011 259 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 APOA1P02647 267 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ATP1B1P05026 303 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TPM3P06753 285 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CRYGCP07315 174 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ALOX5P09917 674 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 SLC35G4P0C7Q5 338 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GAGE12FP0CL80 117 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GAGE12GP0CL81 117 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GAGE12IP0CL82 117 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ANXA3P12429 323 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 POU2F1P14859 743 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GM2AP17900 193 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TUBG1P23258 451 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 HNRNPH3P31942 346 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 AHRP35869 848 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 LEPRP48357 1165 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CSNK1EP49674 416 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 RASSF2P50749 326 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 DNA2P51530 1060 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CCR4P51679 360 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CDH6P55285 790 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 MAP3K7CLP57077 242 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 RPS4XP62701 263 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TPM4P67936 248 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 XIAPP98170 497 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CDKL1Q00532 357 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 OTUD4Q01804 1114 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 NAAAQ02083 359 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CNTN1Q12860 1018 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GAGE1Q13065 139 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GAGE4Q13068 117 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 MAB21L1Q13394 359 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 DRP2Q13474 957 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TUBA3CQ13748 450 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GTF2H2Q13888 395 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 RBM39Q14498 530 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GANABQ14697 944 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 MEF2DQ14814 521 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 STK38Q15208 465 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 RBBP5Q15291 538 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ANGPT1Q15389 498 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 SF3B4Q15427 424 aaKnown RBP eCLIP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CHI3L2Q15782 390 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CDKN3Q16667 212 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 MTHFSDQ2M296 383 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 FAM83EQ2M2I3 478 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 HNRNPA1L2Q32P51 320 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ZNF829Q3KNS6 432 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GGTA1PQ4G0N0 100 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ACSF3Q4G176 576 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 C6orf226Q5I0X4 101 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CEP78Q5JTW2 689 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TCHHL1Q5QJ38 904 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 BEND6Q5SZJ8 279 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 PDPK2PQ6A1A2 396 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TRNP1Q6NT89 227 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GTF2H2CQ6P1K8 395 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TUBA3EQ6PEY2 450 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 VITQ6UXI7 678 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 Q6ZRG5 221 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 UTS2BQ765I0 119 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 G2E3Q7L622 706 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 PIWIL4Q7Z3Z4 852 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 SPRED1Q7Z699 444 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 LINC00523Q86TU6 105 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 GGNQ86UU5 652 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 SATL1Q86VE3 508 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TPRA1Q86W33 373 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 C17orf64Q86WR6 236 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 CNGA4Q8IV77 575 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 ODF3L1Q8IXM7 274 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 MICU2Q8IYU8 434 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 DCP1BQ8IZD4 617 aaKnown RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 LINC00518Q8N0U6 118 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 PYROXD2Q8N2H3 581 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TMEM199Q8N511 208 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 TCEANCQ8N8B7 351 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 Q8N9G6 341 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 RELL2Q8NC24 303 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 C7orf57Q8NEG2 295 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 FAM83FQ8NEG4 500 aaPredicted RBP1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 OR4D5Q8NGN0 318 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 OR13F1Q8NGS4 319 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 OR13C3Q8NGS6 347 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 OR52N5Q8NH56 324 aa1.9□□□□□ -2.11
HMGN2P39-201ENST00000398005 RDH11Q8TC12 318 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms