RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 C11orf49Q9H6J7 331 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 KCNE3Q9Y6H6 103 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 GOLGA4Q13439 2230 aaKnown RBP13.15□□□□□ -0.3
NUP98-204ENST00000397004 LOC102723532A0A0G2JNH3 316 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 FEZF1A0PJY2 475 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 IFNA14P01570 189 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 GZMKP49863 264 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 CRTC2Q53ET0 693 aaPredicted RBP13.15□□□□□ -0.3
NUP98-204ENST00000397004 CEP78Q5JTW2 689 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 LHFPL3Q86UP9 236 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 IQCHQ86VS3 1027 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 TBC1D19Q8N5T2 526 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 SNAPC3Q92966 411 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 KCNJ15Q99712 375 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 MIEF1Q9NQG6 463 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 HRO43593 1189 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ZNF30P17039 623 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 DDCP20711 480 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 HOXD10P28358 340 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 WNT4P56705 351 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 TPBGQ13641 420 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 SLC25A30Q5SVS4 291 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 TCTE3Q8IZS6 198 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 SLC9A6Q92581 669 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ZSCAN5AQ9BUG6 496 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 HDHD5Q9BXW7 423 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 NLNQ9BYT8 704 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 PPIL3Q9H2H8 161 aaKnown RBP13.14□□□□□ -0.31
NUP98-204ENST00000397004 GALNT9Q9HCQ5 603 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 GPR55Q9Y2T6 319 aaPredicted RBP13.14□□□□□ -0.31
NUP98-204ENST00000397004 A0A0G2JN53 185 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ANTXRLA6NF34 631 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 RAB36O95755 333 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 PSKH1P11801 424 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 PSMB5P28074 263 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ACADLP28330 430 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 GSTM5P46439 218 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 DUSP2Q05923 314 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 LRRC32Q14392 662 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 LIX1LQ8IVB5 337 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 SLC30A8Q8IWU4 369 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 EFCAB11Q9BUY7 163 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 LSM7Q9UK45 103 aaKnown RBP13.14□□□□□ -0.31
NUP98-204ENST00000397004 LIPT1Q9Y234 373 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 RANBP2P49792 3224 aaKnown RBP13.14□□□□□ -0.31
NUP98-204ENST00000397004 MEN1O00255 615 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 FRS3O43559 492 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 HLA-DMAP28067 261 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 AVPR1BP47901 424 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 VEGFBP49765 207 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 RAB25P57735 213 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ABATP80404 500 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ZNF750Q32MQ0 723 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 PDZK1Q5T2W1 519 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 OR4F15Q8NGB8 312 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 AP2M1Q96CW1 435 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 TIMP4Q99727 224 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 OR2AG1Q9H205 316 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 ANKRA2Q9H9E1 313 aa13.14□□□□□ -0.31
NUP98-204ENST00000397004 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
NUP98-204ENST00000397004 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 C2orf92A0A1B0GVN3 265 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 A0A1W2PRQ8 180 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 CPN2P22792 545 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 MMP12P39900 470 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 FRKP42685 505 aaPredicted RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 MANFP55145 182 aaKnown RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 Q8N402 240 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 BBS1Q8NFJ9 593 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 OR5AR1Q8NGP9 310 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 OR9A1PQ8NGU1 263 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 ZFPM2Q8WW38 1151 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 RNFT2Q96EX2 444 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 MED18Q9BUE0 208 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 HEATR5BQ9P2D3 2071 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 GRM6O15303 877 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 INHAP05111 366 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 CHRM4P08173 479 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 ALPPL2P10696 532 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 SYN1P17600 705 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 DDI2Q5TDH0 399 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 HSDL2Q6YN16 418 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 C11orf96Q7Z7L8 435 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 METTL3Q86U44 580 aaKnown RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 DUSP18Q8NEJ0 188 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 EXOSC8Q96B26 276 aaKnown RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 CLIP3Q96DZ5 547 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 MTERF3Q96E29 417 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 KCTD7Q96MP8 289 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 ARHGAP9Q9BRR9 750 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 YIPF4Q9BSR8 244 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms