RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MS4A4EQ96PG1 132 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 CSF3RQ99062 836 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 GAS2L1Q99501 681 aaPredicted RBP14.06□□□□□ -0.16
CBX3-202ENST00000396386 LYRM4Q9HD34 91 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 C2orf42Q9NWW7 574 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 CALML5Q9NZT1 146 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 ACAD8Q9UKU7 415 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 CA14Q9ULX7 337 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 PCDHGA10Q9Y5H3 936 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 IGHV1OR15-9A0A0B4J2B8 117 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 OR5K3A6NET4 321 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 M0R3H8 397 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 CASC3O15234 703 aaKnown RBP14.06□□□□□ -0.16
CBX3-202ENST00000396386 FUT4P22083 530 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 HHEXQ03014 270 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 MVKQ03426 396 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 RUNX2Q13950 521 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 DCST1Q5T197 706 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 ATAD3BQ5T9A4 648 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 ARMC6Q6NXE6 501 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 Q7L0L9 218 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 OLIG3Q7RTU3 272 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 LACC1Q8IV20 430 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 DEFB123Q8N688 67 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 ZDHHC1Q8WTX9 485 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 FAR1Q8WVX9 515 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 ORAI3Q9BRQ5 295 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 DCUN1D5Q9BTE7 237 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 LRRC61Q9BV99 259 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 PINK1Q9BXM7 581 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 ACTRT3Q9BYD9 372 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 TPSD1Q9BZJ3 242 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 LMAN1LQ9HAT1 526 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 IMPAD1Q9NX62 359 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 WARS2Q9UGM6 360 aaKnown RBP14.06□□□□□ -0.16
CBX3-202ENST00000396386 LIPT1Q9Y234 373 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 SLC22A7Q9Y694 548 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 SPACA6W5XKT8 324 aa14.06□□□□□ -0.16
CBX3-202ENST00000396386 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 TRIM64BA6NI03 449 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 B4DGG1 531 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 MT-ND2P03891 347 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 EIF2S1P05198 315 aaKnown RBP14.05□□□□□ -0.16
CBX3-202ENST00000396386 POU2F1P14859 743 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 IDH2P48735 452 aaKnown RBP14.05□□□□□ -0.16
CBX3-202ENST00000396386 MAN2A2P49641 1150 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 GP2P55259 537 aaKnown RBP14.05□□□□□ -0.16
CBX3-202ENST00000396386 EMX1Q04741 257 aaPredicted RBP14.05□□□□□ -0.16
CBX3-202ENST00000396386 C1orf61Q13536 156 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 KLHL17Q6TDP4 642 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 PRSS48Q7RTY5 328 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 C16orf62Q7Z3J2 963 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 ZNF761Q86XN6 746 aaPredicted RBP14.05□□□□□ -0.16
CBX3-202ENST00000396386 RBM45Q8IUH3 476 aaKnown RBP14.05□□□□□ -0.16
CBX3-202ENST00000396386 ZNF687Q8N1G0 1237 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 RLN3Q8WXF3 142 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 RORBQ92753 470 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 UBE2FQ969M7 185 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 GIMAP5Q96F15 307 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 FTSJ1Q9UET6 329 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
CBX3-202ENST00000396386 MRPS2Q9Y399 296 aaKnown RBP14.05□□□□□ -0.16
CBX3-202ENST00000396386 TMEM131Q92545 1883 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 DSPPQ9NZW4 1301 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 ZNF860A6NHJ4 632 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FAM227AF5H4B4 570 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SEMA7AO75326 666 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 INMTO95050 263 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 ALPPP05187 535 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 CCNA2P20248 432 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 XKP51811 444 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 MAPK10P53779 464 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 UGT2B15P54855 530 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 OLR1P78380 273 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SIM1P81133 766 aaPredicted RBP14.04□□□□□ -0.16
CBX3-202ENST00000396386 HPCAP84074 193 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FOXD4Q12950 439 aaPredicted RBP14.04□□□□□ -0.16
CBX3-202ENST00000396386 MANEAQ5SRI9 462 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FAM111BQ6SJ93 734 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 AHSA2Q719I0 299 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 COMTD1Q86VU5 262 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FAM160A2Q8N612 972 aaPredicted RBP14.04□□□□□ -0.16
CBX3-202ENST00000396386 CSNK1A1LQ8N752 337 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FAM46DQ8NEK8 389 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 TRNT1Q96Q11 434 aaKnown RBP14.04□□□□□ -0.16
CBX3-202ENST00000396386 CCDC3Q9BQI4 270 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 RHNO1Q9BSD3 238 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 PLCXD1Q9NUJ7 323 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 DNAAF2Q9NVR5 837 aaKnown RBP14.04□□□□□ -0.16
CBX3-202ENST00000396386 GIN1Q9NXP7 522 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 NTMQ9P121 344 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 POMT2Q9UKY4 750 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 DUSP12Q9UNI6 340 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 KCNE3Q9Y6H6 103 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SLCO1B1Q9Y6L6 691 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 XIRP2A4UGR9 3374 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 A0A1W2PPW3 197 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 SYT5O00445 386 aa14.04□□□□□ -0.16
CBX3-202ENST00000396386 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms