RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 LPCAT4Q643R3 524 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 IL17RCQ8NAC3 791 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 AGBL5Q8NDL9 886 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 WFDC5Q8TCV5 224 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 C16orf78Q8WTQ4 265 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CHRNA10Q9GZZ6 450 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CNOT2Q9NZN8 540 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 A0A1W2PPC4 97 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 FAM170BA6NMN3 283 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ACOX3O15254 700 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LAMP1P11279 417 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RYKP34925 604 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 KCNAB2Q13303 367 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 FLYWCH1Q4VC44 716 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PIP5KL1Q5T9C9 394 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 DDI2Q5TDH0 399 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SLC2A7Q6PXP3 512 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 OR52E1Q8NGJ3 308 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 NACC2Q96BF6 587 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF354BQ96LW1 612 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 DGCR6LQ9BY27 220 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 OR52A5Q9H2C5 316 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 MMP27Q9H306 513 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 NMNAT1Q9HAN9 279 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PLGRKTQ9HBL7 147 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 NANSQ9NR45 359 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CYP8B1Q9UNU6 501 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PLEKHM1Q9Y4G2 1056 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PCDHA9Q9Y5H5 950 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 GXYLT2A0PJZ3 443 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CFIP05156 583 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CYC1P08574 325 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 IL3P08700 152 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SCN1BQ07699 218 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF155Q12901 538 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC116Q8IYX3 515 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF707Q96C28 371 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PTCHD1Q96NR3 888 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PRRX2Q99811 253 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 BCL2L10Q9HD36 194 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TESMINQ9Y4I5 508 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CCRL2O00421 344 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 BCAT2O15382 392 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 MAGEB3O15480 346 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PLOD3O60568 738 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF45Q02386 682 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ARL6IP1Q15041 203 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PON2Q15165 354 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 KCTD18Q6PI47 426 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SLC19A3Q9BZV2 496 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SERHL2Q9H4I8 314 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ACTR10Q9NZ32 417 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TAAR2Q9P1P5 351 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LYVE1Q9Y5Y7 322 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 A0A087WV62 115 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PHYHO14832 338 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LATO43561 262 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CSTAP01040 98 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ALDOCP09972 364 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PRDX3P30048 256 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PGFP49763 221 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RAB40BQ12829 278 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ANGPT1Q15389 498 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LYSMD4Q5XG99 296 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ABHD17CQ6PCB6 329 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 GATAD2AQ86YP4 633 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 EPHX4Q8IUS5 362 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SLC44A3Q8N4M1 653 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PSD4Q8NDX1 1056 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SLC22A8Q8TCC7 542 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 COX14Q96I36 57 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SACM1LQ9NTJ5 587 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ELOA3DA6NLF2 546 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RPLP0P05388 317 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 HNRNPCP07910 306 aaKnown RBP eCLIP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CCR2P41597 374 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 EFR3AQ14156 821 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RPE65Q16518 533 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZIK1Q3SY52 487 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ELOA3BQ3SY89 546 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 MLIPQ5VWP3 458 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ULK3Q6PHR2 472 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 FIGLAQ6QHK4 219 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PLEKHG7Q6ZR37 379 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 DND1Q8IYX4 353 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ELOA3Q8NG57 546 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CLIP3Q96DZ5 547 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PRRC1Q96M27 445 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CENPOQ9BU64 300 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PRTFDC1Q9NRG1 225 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 INPP5EQ9NRR6 644 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 B4GALT7Q9UBV7 327 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PCDHGB2Q9Y5G2 931 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SPTY2D1-AS1A0A0U1RR47 76 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 A0A1W2PRQ8 180 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TRAPPC13A5PLN9 417 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CHURC1-FNTBB4DL54 471 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 UBFD1O14562 309 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PRODHO43272 600 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms