RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 FBN3Q75N90 2809 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 C2orf72A6NCS6 295 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 H0YIV9 168 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 ZSCAN12O43309 604 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 ACTL6AO96019 429 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 HEXAP06865 529 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 ABCB1P08183 1280 aaPredicted RBP19.24■□□□□ 0.67
TRAF4-203ENST00000394925 LTA4HP09960 611 aaKnown RBP19.24■□□□□ 0.67
TRAF4-203ENST00000394925 MTHFD2P13995 350 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 NEK2P51955 445 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 MRPS25P82663 173 aaKnown RBP19.24■□□□□ 0.67
TRAF4-203ENST00000394925 SRYQ05066 204 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 CUL3Q13618 768 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 NNATQ16517 81 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 GRTP1Q5TC63 336 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 C6orf163Q5TEZ5 329 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 DESI1Q6ICB0 168 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 PLXDC2Q6UX71 529 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 C3orf62Q6ZUJ4 267 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 CXorf67Q86X51 503 aaPredicted RBP19.24■□□□□ 0.67
TRAF4-203ENST00000394925 NUDT13Q86X67 352 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 ISL2Q96A47 359 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 INTS12Q96CB8 462 aaKnown RBP19.24■□□□□ 0.67
TRAF4-203ENST00000394925 NXNL1Q96CM4 212 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 NTNG2Q96CW9 530 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 REPS1Q96D71 796 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 SFXN3Q9BWM7 321 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 NXF5Q9H1B4 397 aaKnown RBP19.24■□□□□ 0.67
TRAF4-203ENST00000394925 FETUBQ9UGM5 382 aa19.24■□□□□ 0.67
TRAF4-203ENST00000394925 LRRC14BA6NHZ5 514 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 CASKO14936 926 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 CDH16O75309 829 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 LY6G6DO95868 133 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 CPN1P15169 458 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 NT5EP21589 574 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 GCKP35557 465 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 PPM1NQ8N819 430 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 OR4K14Q8NGD5 310 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 SMPDL3BQ92485 455 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 TM9SF2Q99805 663 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 MAPRE3Q9UPY8 281 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 EIF3LQ9Y262 564 aaKnown RBP19.23■□□□□ 0.67
TRAF4-203ENST00000394925 DTX4Q9Y2E6 619 aa19.23■□□□□ 0.67
TRAF4-203ENST00000394925 H0Y3Z8 333 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 CCDC188H7C350 402 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 ARHGEF9O43307 516 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 PPM1BO75688 479 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 RCBTB2O95199 551 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 GPX3P22352 226 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 CRABP2P29373 138 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 PIK3CGP48736 1102 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 XKP51811 444 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 PFKFB4Q16877 469 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 CYS1Q717R9 158 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 P3H2Q8IVL5 708 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 GCNT2Q8N0V5 402 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 C17orf47Q8NEP4 570 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 OR7G1Q8NGA0 311 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 RDH11Q8TC12 318 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 ZFP3Q96NJ6 502 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 NODALQ96S42 347 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 GALNT9Q9HCQ5 603 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 SERHLQ9NQF3 203 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 RNF11Q9Y3C5 154 aa19.22■□□□□ 0.67
TRAF4-203ENST00000394925 ZANQ9Y493 2812 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 SYCE1LA8MT33 242 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 FAM171A2A8MVW0 826 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 SNPHO15079 494 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 ICOSLGO75144 302 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 GFAPP14136 432 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 GPX6P59796 221 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 KBTBD12Q3ZCT8 623 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 Q5PR19 223 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 SLC30A6Q6NXT4 461 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 ENPP6Q6UWR7 440 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 NUP54Q7Z3B4 507 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 TRIM42Q8IWZ5 723 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 OR14L1PQ8NHC6 308 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 WDR20Q8TBZ3 569 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 NUDT8Q8WV74 236 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 KCTD4Q8WVF5 259 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 HGDQ93099 445 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 OSBPL11Q9BXB4 747 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 DPH5Q9H2P9 285 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 IPPKQ9H8X2 491 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 PSD3Q9NYI0 1048 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 NDRG3Q9UGV2 375 aa19.21■□□□□ 0.67
TRAF4-203ENST00000394925 FOXE1O00358 373 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-203ENST00000394925 EIF3HO15372 352 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRAF4-203ENST00000394925 UGDHO60701 494 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 CPMP14384 443 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 PORP16435 677 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-203ENST00000394925 NAGAP17050 411 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 S1PR1P21453 382 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 PTGDSP41222 190 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 CALCOCO2Q13137 446 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 GTF2H2Q13888 395 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 GTF2H2CQ6P1K8 395 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 GOLGA7Q7Z5G4 137 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 ADGRE4PQ86SQ3 457 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms