RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 SLC35G5Q96KT7 338 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 DAPL1A0PJW8 107 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 SOCS5O75159 536 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
NFKB1-202ENST00000394820 NTSP30990 170 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 VIPR2P41587 438 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 GPLD1P80108 840 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 PEX5LQ8IYB4 626 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 HORMAD2Q8N7B1 307 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 OR7G1Q8NGA0 311 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 IRF7Q92985 503 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 C12orf4Q9NQ89 552 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 STUB1Q9UNE7 303 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 ZC3H12DA2A288 527 aaKnown RBP12.53□□□□□ -0.4
NFKB1-202ENST00000394820 LYRM1O43325 122 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 SOX18P35713 384 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 AP1S2P56377 157 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 LINGO2Q7L985 606 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 VWA5B2Q8N398 1253 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 C16orf78Q8WTQ4 265 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 OR51I1Q9H343 314 aa12.53□□□□□ -0.4
NFKB1-202ENST00000394820 NFKBIL1Q9UBC1 381 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-202ENST00000394820 NDRG2Q9UN36 371 aaKnown RBP12.53□□□□□ -0.4
NFKB1-202ENST00000394820 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
NFKB1-202ENST00000394820 TBC1D3BA6NDS4 549 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 PPM1DO15297 605 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 KHDRBS3O75525 346 aaKnown RBP12.52□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF821O75541 412 aaPredicted RBP12.52□□□□□ -0.4
NFKB1-202ENST00000394820 RPP14O95059 124 aaKnown RBP12.52□□□□□ -0.4
NFKB1-202ENST00000394820 PROS1P07225 676 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 RHOP08100 348 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 IDSP22304 550 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 PRKACBP22694 351 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 RPL4P36578 427 aaKnown RBP12.52□□□□□ -0.4
NFKB1-202ENST00000394820 FNTBP49356 437 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 SRP9P49458 86 aaKnown RBP12.52□□□□□ -0.4
NFKB1-202ENST00000394820 VSX2P58304 361 aaPredicted RBP12.52□□□□□ -0.4
NFKB1-202ENST00000394820 CDK10Q15131 360 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF783Q6ZMS7 281 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 ASB11Q8WXH4 323 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 USP7Q93009 1102 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 PMEPA1Q969W9 287 aa12.52□□□□□ -0.4
NFKB1-202ENST00000394820 LOC100509620A0A075B734 347 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
NFKB1-202ENST00000394820 ERI3O43414 337 aaKnown RBP12.52□□□□□ -0.41
NFKB1-202ENST00000394820 HCN1O60741 890 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 RASGRP1O95267 797 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 FGBP02675 491 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 AHRP35869 848 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 CLDN2P57739 230 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 TCEAL5Q5H9L2 206 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 MEIOBQ8N635 442 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 ADAMTS15Q8TE58 950 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 RIT1Q92963 219 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 BRD7Q9NPI1 651 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 SLAMF7Q9NQ25 335 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 FBXL12Q9NXK8 326 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 HSPE1-MOB4S4R3N1 261 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 PRAMEF4O60810 478 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 CSN2P05814 226 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 EPCAMP16422 314 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 GPX2P18283 190 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 GPR19Q15760 415 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 SPIN4Q56A73 249 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 ZNF311Q5JNZ3 666 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 PRAMEF9Q5VWM5 478 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 Q6ZNB5 142 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 OR8J1Q8NGP2 316 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 OR2A12Q8NGT7 310 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 OR10G6Q8NH81 332 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 DNAJB8Q8NHS0 232 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 SLC7A6Q92536 515 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 IFT27Q9BW83 186 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 ZCCHC2Q9C0B9 1178 aaKnown RBP12.52□□□□□ -0.41
NFKB1-202ENST00000394820 TXNL4BQ9NX01 149 aaKnown RBP12.52□□□□□ -0.41
NFKB1-202ENST00000394820 TNFRSF10DQ9UBN6 386 aa12.52□□□□□ -0.41
NFKB1-202ENST00000394820 ABHD14A-ACY1A0A1B0GW23 586 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ANTXRLA6NF34 631 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PRKYO43930 277 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 MPZL2O60487 215 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ACP5P13686 325 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PRKCAP17252 672 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 CXCR2P25025 360 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 CLCNKAP51800 687 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PRKCDQ05655 676 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PRAMEF14Q5SWL7 426 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 FAM27D1Q5T7N8 215 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PRAMEF13Q5VWM6 474 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ESPNLQ6ZVH7 1005 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 HTR3DQ70Z44 454 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 FAM124AQ86V42 546 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 UBQLNLQ8IYU4 475 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 TMEM145Q8NBT3 493 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 OR6K6Q8NGW6 343 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 OR6F1Q8NGZ6 308 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PDLIM5Q96HC4 596 aaKnown RBP12.51□□□□□ -0.41
NFKB1-202ENST00000394820 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms