RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CALML5Q9NZT1 146 aa20.81■□□□□ 0.92
HMGA2-203ENST00000393578 NDUFA13Q9P0J0 144 aa20.81■□□□□ 0.92
HMGA2-203ENST00000393578 PCDHGA8Q9Y5G5 932 aa20.81■□□□□ 0.92
HMGA2-203ENST00000393578 KCNE3Q9Y6H6 103 aa20.81■□□□□ 0.92
HMGA2-203ENST00000393578 CHST10O43529 356 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 AGR2O95994 175 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 TPD52P55327 224 aaPredicted RBP20.8■□□□□ 0.92
HMGA2-203ENST00000393578 ID2Q02363 134 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 BNIP3Q12983 259 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 FAM53BQ14153 422 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 MICAQ29983 383 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 ZNF691Q5VV52 312 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 SATL1Q86VE3 508 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 SHISA5Q8N114 240 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 OR52J3Q8NH60 311 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 EPB41L1Q9H4G0 881 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 RIBC2Q9H4K1 309 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 SOHLH2Q9NX45 425 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 GIN1Q9NXP7 522 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 KCND3Q9UK17 655 aa20.8■□□□□ 0.92
HMGA2-203ENST00000393578 CACNA1IQ9P0X4 2223 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 A0A087WV62 115 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 A0A087WXM4 84 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 SMIM31A0A1B0GVY4 71 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 A8MVJ9 347 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 BCKDKO14874 412 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 IFI6P09912 130 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 GNSP15586 552 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 LIMS1P48059 325 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 ARRB1P49407 418 aaPredicted RBP20.79■□□□□ 0.92
HMGA2-203ENST00000393578 IL1RL1Q01638 556 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 GARNL3Q5VVW2 1013 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 NKAIN2Q5VXU1 208 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 CDC73Q6P1J9 531 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 ADAMTS15Q8TE58 950 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 AHCYL2Q96HN2 611 aaKnown RBP20.79■□□□□ 0.92
HMGA2-203ENST00000393578 C19orf53Q9UNZ5 99 aaPredicted RBP20.79■□□□□ 0.92
HMGA2-203ENST00000393578 A0A0A6YYC8 382 aaPredicted RBP20.79■□□□□ 0.92
HMGA2-203ENST00000393578 TRIM64CA6NLI5 447 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 I3L1I5 382 aaPredicted RBP20.79■□□□□ 0.92
HMGA2-203ENST00000393578 GADD45GO95257 159 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 BMP10O95393 424 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 ZBTB11O95625 1053 aaPredicted RBP20.79■□□□□ 0.92
HMGA2-203ENST00000393578 ANXA8P13928 327 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 RYKP34925 604 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 SOX18P35713 384 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 KEAP1Q14145 624 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 EXOC3L2Q2M3D2 409 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 FAM214AQ32MH5 1076 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 TCTE1Q5JU00 501 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 FHL5Q5TD97 284 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 WDR5BQ86VZ2 330 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 CARFQ8N187 725 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 OR10G2Q8NGC3 310 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 FEVQ99581 238 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 ELF4Q99607 663 aaPredicted RBP20.79■□□□□ 0.92
HMGA2-203ENST00000393578 CCDC88CQ9P219 2028 aa20.79■□□□□ 0.92
HMGA2-203ENST00000393578 IGHV1OR21-1A0A087WYE8 117 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 PLOD3O60568 738 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 PDGFBP01127 241 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-203ENST00000393578 GLB1P16278 677 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 GPR3P46089 330 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 DHPSP49366 369 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-203ENST00000393578 CDH15P55291 814 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 OR1D5P58170 312 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 ISL1P61371 349 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 TRMT12Q53H54 448 aaKnown RBP20.78■□□□□ 0.92
HMGA2-203ENST00000393578 HEPHL1Q6MZM0 1159 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 C16orf62Q7Z3J2 963 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 SLC35F3Q8IY50 421 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 PHF10Q8WUB8 498 aaKnown RBP20.78■□□□□ 0.92
HMGA2-203ENST00000393578 ANKRD9Q96BM1 317 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-203ENST00000393578 SLC35A4Q96G79 324 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 PSD2Q9BQI7 771 aa20.78■□□□□ 0.92
HMGA2-203ENST00000393578 PRMT8Q9NR22 394 aaPredicted RBP20.78■□□□□ 0.92
HMGA2-203ENST00000393578 HYKKA2RU49 373 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 CASC3O15234 703 aaKnown RBP20.77■□□□□ 0.92
HMGA2-203ENST00000393578 FOXS1O43638 330 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 MED26O95402 600 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 NSA2O95478 260 aaKnown RBP20.77■□□□□ 0.92
HMGA2-203ENST00000393578 GIMD1P0DJR0 217 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 RNH1P13489 461 aaKnown RBP20.77■□□□□ 0.92
HMGA2-203ENST00000393578 ELK4P28324 431 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 GANABQ14697 944 aaKnown RBP20.77■□□□□ 0.92
HMGA2-203ENST00000393578 NADK2Q4G0N4 442 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 COLEC12Q5KU26 742 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 TCTN3Q6NUS6 607 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 OLIG3Q7RTU3 272 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 SLC5A8Q8N695 610 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 SLC16A11Q8NCK7 471 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 SETD9Q8NE22 299 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 ZNF675Q8TD23 568 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 HDAC2Q92769 488 aaKnown RBP20.77■□□□□ 0.92
HMGA2-203ENST00000393578 SLC38A1Q9H2H9 487 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 CXorf56Q9H5V9 222 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 DSPPQ9NZW4 1301 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 FFAR1O14842 300 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 TDGF1P13385 188 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 MAPK10P53779 464 aa20.77■□□□□ 0.92
HMGA2-203ENST00000393578 PRICKLE4Q2TBC4 344 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms