RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 ILKQ13418 452 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 SERINC3Q13530 473 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 SCARB2Q14108 478 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 OCLNQ16625 522 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 HFEQ30201 348 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 CRB2Q5IJ48 1285 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 SPOUT1Q5T280 376 aaKnown RBP6.8□□□□□ -1.32
NPHP1-203ENST00000393272 HIST2H2AA3Q6FI13 130 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 SLC27A4Q6P1M0 643 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 SEZ6L2Q6UXD5 910 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 LRRC28Q86X40 367 aaPredicted RBP6.8□□□□□ -1.32
NPHP1-203ENST00000393272 SIAH3Q8IW03 269 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 SAMD12Q8N8I0 201 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 VPS37AQ8NEZ2 397 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 CSGALNACT1Q8TDX6 532 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 UBTD2Q8WUN7 234 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 INTS12Q96CB8 462 aaKnown RBP6.8□□□□□ -1.32
NPHP1-203ENST00000393272 C11orf24Q96F05 449 aaPredicted RBP6.8□□□□□ -1.32
NPHP1-203ENST00000393272 HIST1H2AHQ96KK5 128 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 FCRL1Q96LA6 429 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 HIST1H2AJQ99878 128 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 DUSP26Q9BV47 211 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 TINAGL1Q9GZM7 467 aaPredicted RBP6.8□□□□□ -1.32
NPHP1-203ENST00000393272 PITHD1Q9GZP4 211 aaPredicted RBP6.8□□□□□ -1.32
NPHP1-203ENST00000393272 CFAP97Q9P2B7 532 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 CHST2Q9Y4C5 530 aa6.8□□□□□ -1.32
NPHP1-203ENST00000393272 TDRD15B5MCY1 1934 aaKnown RBP6.8□□□□□ -1.32
NPHP1-203ENST00000393272 KIAA1671Q9BY89 1806 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 CEP350Q5VT06 3117 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 TMEM129A0AVI4 362 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 GSAPA4D1B5 854 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 RFXAPO00287 272 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SSX5O60225 188 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 B4GALT3O60512 393 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 TRBC1P01850 177 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 MT-ND4P03905 459 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 C4BPBP20851 252 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 ACSL1P33121 698 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 MAPKAPK2P49137 400 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 LIM2P55344 173 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SIM1P81133 766 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SERTAD2Q14140 314 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 PUM1Q14671 1186 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 XKR6Q5GH73 641 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 MARCH8Q5T0T0 291 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 PTRHD1Q6GMV3 140 aaKnown RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 Q6ZTK2 550 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 TOMM5Q8N4H5 51 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 CLDN19Q8N6F1 224 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 TRPV1Q8NER1 839 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 RPLP0P6Q8NHW5 317 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SCARB1Q8WTV0 552 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 ZDHHC1Q8WTX9 485 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 GTF3C2Q8WUA4 911 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 UPF1Q92900 1129 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 IGSF8Q969P0 613 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 ZNF582Q96NG8 517 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SYT17Q9BSW7 474 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 BOCQ9BWV1 1114 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 NKX6-2Q9C056 277 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 NMUR1Q9HB89 426 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SEMA3GQ9NS98 782 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 ABCC13Q9NSE7 274 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 NKIRAS2Q9NYR9 191 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 EDARQ9UNE0 448 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 CORO2BQ9UQ03 480 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 KCNK7Q9Y2U2 307 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SLC6A5Q9Y345 797 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 PRKAB1Q9Y478 270 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 THSD7AQ9UPZ6 1657 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 HELZP42694 1942 aaKnown RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 KCNE1BA0A087WTH5 132 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 TRBC2A0A5B9 178 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 PQLC2LA1A4F0 135 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 CHURC1-FNTBB4DL54 471 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 D6RAR5 112 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 F8W810 466 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 PTGESO14684 152 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 OR10H3O60404 316 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 SDC3O75056 442 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 URODP06132 367 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 FABP1P07148 127 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 H2AFB1P0C5Y9 115 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 LIMS3P0CW19 117 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 LIMS4P0CW20 117 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 CELP19835 753 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 PRPH2P23942 346 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 RBMS1P29558 406 aaKnown RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 CAPZA2P47755 286 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 LHX1P48742 406 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 RGS4P49798 205 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 ERVK-25P63136 954 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 PLD1Q13393 1074 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 BOP1Q14137 746 aaKnown RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 HLXQ14774 488 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-203ENST00000393272 UAP1L1Q3KQV9 507 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 XKR4Q5GH76 650 aa6.79□□□□□ -1.32
NPHP1-203ENST00000393272 MS4A13Q5J8X5 152 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms