RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 PGBD2Q6P3X8 592 aa24.08■■□□□ 1.44
SMARCD3-203ENST00000392811 OR13H1Q8NG92 308 aa24.08■■□□□ 1.44
SMARCD3-203ENST00000392811 PATE1Q8WXA2 126 aa24.08■■□□□ 1.44
SMARCD3-203ENST00000392811 BTBD2Q9BX70 525 aa24.08■■□□□ 1.44
SMARCD3-203ENST00000392811 ITPAQ9BY32 194 aa24.08■■□□□ 1.44
SMARCD3-203ENST00000392811 KLHL25Q9H0H3 589 aa24.08■■□□□ 1.44
SMARCD3-203ENST00000392811 SH3PXD2BA1X283 911 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 LGI1O95970 557 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 CD36P16671 472 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 UGT2B15P54855 530 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 VBP1P61758 197 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 TNFRSF17Q02223 184 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 ILF3Q12906 894 aaKnown RBP eCLIP24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 ANKDD1AQ495B1 522 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 FIGLAQ6QHK4 219 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 FAM92BQ6ZTR7 304 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 PTCHD4Q6ZW05 846 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 FLCNQ8NFG4 579 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 OR6T1Q8NGN1 323 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 HSPBAP1Q96EW2 488 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 QRSL1Q9H0R6 528 aaKnown RBP24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 HS3ST3A1Q9Y663 406 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 BRWD1Q9NSI6 2320 aa24.07■■□□□ 1.44
SMARCD3-203ENST00000392811 SHISA7A6NL88 538 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 SOX14O95416 240 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 IGFBP1P08833 259 aaPredicted RBP24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 SMIM10L1P0DMW3 83 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 BUD31P41223 144 aaPredicted RBP24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 MAN2A2P49641 1150 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 CCINQ13939 588 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 SLC22A18ASQ8N1D0 253 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 SMIM10Q96HG1 83 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 C6orf106Q9H6K1 298 aaPredicted RBP24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 C11orf16Q9NQ32 467 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 KCMF1Q9P0J7 381 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 A0A1W2PRQ8 180 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 MPZL2O60487 215 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 NME6O75414 186 aaPredicted RBP24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 CPN2P22792 545 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 ILKQ13418 452 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 DEFB134Q4QY38 66 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 PRAMEF8Q5VWM4 474 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 PRAMEF7Q5VXH5 474 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 PODNL1Q6PEZ8 512 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 STX19Q8N4C7 294 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 B3GNT7Q8NFL0 401 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 FNDC11Q9BVV2 318 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 TCEAL2Q9H3H9 227 aaPredicted RBP24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 ANKMY1Q9P2S6 941 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 PILRAQ9UKJ1 303 aa24.06■■□□□ 1.44
SMARCD3-203ENST00000392811 ARHGEF17Q96PE2 2063 aaPredicted RBP24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 M0R082 166 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 TPST2O60704 377 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 LIPAP38571 399 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 NCS1P62166 190 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 OCA2Q04671 838 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 ST3GAL4Q11206 333 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 SUZ12Q15022 739 aaKnown RBP24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 FBXO43Q4G163 708 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 FAM46DQ8NEK8 389 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 RPL3LQ92901 407 aaKnown RBP24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 SLC38A4Q969I6 547 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 GIMAP5Q96F15 307 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 SERINC2Q96SA4 455 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 PINK1Q9BXM7 581 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 ROGDIQ9GZN7 287 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 PHF11Q9UIL8 331 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 C10orf142B7Z368 130 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 M0R3G1 203 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 CASC3O15234 703 aaKnown RBP24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 DNAJB6O75190 326 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 IGHV4-34P06331 123 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 TARDBPQ13148 414 aaKnown RBP eCLIP24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 RUNX2Q13950 521 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 SYT16Q17RD7 645 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 ABI3BPQ7Z7G0 1075 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 SLC15A4Q8N697 577 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 POLR2J3Q9H1A7 115 aaKnown RBP24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 SLC38A1Q9H2H9 487 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 MAN2C1Q9NTJ4 1040 aa24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 USP36Q9P275 1121 aaKnown RBP24.05■■□□□ 1.44
SMARCD3-203ENST00000392811 LOC105369274A0A096LPK9 316 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 LOC102723532A0A0G2JNH3 316 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 SH3D21A4FU49 640 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 CLDN24A6NM45 220 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 TLR4O00206 839 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 ASNA1O43681 348 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 TNFP01375 233 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 C21orf59P57076 290 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 CHRNEQ04844 493 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 WDR53Q7Z5U6 358 aaPredicted RBP24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 SLCO6A1Q86UG4 719 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 SFTPA2Q8IWL1 248 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 OR4N4Q8N0Y3 316 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 LRRC25Q8N386 305 aaPredicted RBP24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 FRMD1Q8N878 549 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 GPBAR1Q8TDU6 330 aa24.04■■□□□ 1.44
SMARCD3-203ENST00000392811 ZNF576Q9H609 170 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms